Conservation of cofitness between Atu2130 and Atu3354 in Agrobacterium fabrum C58

17 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu2130 hypothetical protein 1.0 Atu3354 pyrroloquinoline-quinone-dependent quinate dehydrogenase 0.15 20
Azospirillum brasilense Sp245 0.58 AZOBR_RS10820 endoribonuclease 0.09 AZOBR_RS12740 dehydrogenase low > 97
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS05260 RidA family protein 0.61 QEN71_RS38800 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family low > 153
Variovorax sp. SCN45 0.47 GFF3101 RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein 0.57 GFF4425 Quinate/shikimate dehydrogenase [Pyrroloquinoline-quinone] (EC 1.1.5.8) low > 127
Dinoroseobacter shibae DFL-12 0.47 Dshi_3201 Endoribonuclease L-PSP (RefSeq) 0.38 Dshi_2294 Pyrrolo-quinoline quinone (RefSeq) low > 64
Pseudomonas simiae WCS417 0.47 PS417_27700 cytochrome C2 0.69 PS417_10960 quinate dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS29375 RidA family protein 0.70 PFLU_RS11320 glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase low > 109
Pseudomonas fluorescens SBW25 0.46 PFLU_RS29375 RidA family protein 0.70 PFLU_RS11320 glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase low > 109
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_2374 Translation initiation inhibitor 0.71 Pf1N1B4_5582 Quinate/shikimate dehydrogenase [Pyrroloquinoline-quinone] (EC 1.1.99.25) — —
Pseudomonas putida KT2440 0.45 PP_4435 conserved protein of unknown function 0.69 PP_3569 quinate dehydrogenase (quinone) low > 96
Erwinia tracheiphila SCR3 0.44 LU632_RS13155 RidA family protein 0.69 LU632_RS17770 glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase low > 74
Pseudomonas fluorescens GW456-L13 0.44 PfGW456L13_813 Translation initiation inhibitor 0.54 PfGW456L13_1173 Quinate/shikimate dehydrogenase [Pyrroloquinoline-quinone] (EC 1.1.99.25) low > 87
Serratia liquefaciens MT49 0.43 IAI46_14555 RidA family protein 0.71 IAI46_12340 glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase low > 86
Pantoea sp. MT58 0.43 IAI47_08805 RidA family protein 0.70 IAI47_05085 glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase low > 76
Rahnella sp. WP5 0.42 EX31_RS10620 RidA family protein 0.54 EX31_RS02610 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family low > 89
Enterobacter asburiae PDN3 0.39 EX28DRAFT_0749 Putative translation initiation inhibitor, yjgF family 0.53 EX28DRAFT_1255 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family low > 76
Enterobacter sp. TBS_079 0.39 MPMX20_02715 2-iminobutanoate/2-iminopropanoate deaminase 0.53 MPMX20_02211 Quinate/shikimate dehydrogenase (quinone) low > 85
Klebsiella michiganensis M5al 0.37 BWI76_RS17820 hypothetical protein 0.53 BWI76_RS13270 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family low > 92

Not shown: 56 genomes with orthologs for Atu2130 only; 0 genomes with orthologs for Atu3354 only