Conservation of cofitness between Atu3115 and Atu0607 in Agrobacterium fabrum C58

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu3115 TetR family transcriptional regulator 1.0 Atu0607 isocitrate lyase 0.26 19
Sinorhizobium meliloti 1021 0.55 SMc04134 transcriptional regulator 0.95 SMc00768 isocitrate lyase low > 103
Rhizobium sp. OAE497 0.53 ABIE40_RS00085 TetR family transcriptional regulator 0.91 ABIE40_RS03255 isocitrate lyase low > 107
Azospirillum sp. SherDot2 0.45 MPMX19_02996 HTH-type transcriptional repressor NicS 0.72 MPMX19_05830 Isocitrate lyase low > 112
Azospirillum brasilense Sp245 0.42 AZOBR_RS11765 TetR family transcriptional regulator 0.69 AZOBR_RS02405 isocitrate lyase low > 97
Variovorax sp. SCN45 0.42 GFF4821 Transcriptional regulator, AcrR family 0.55 GFF4829 Isocitrate lyase (EC 4.1.3.1) low > 127
Variovorax sp. OAS795 0.42 ABID97_RS11095 TetR/AcrR family transcriptional regulator 0.63 ABID97_RS11115 isocitrate lyase low > 91
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS20790 TetR family transcriptional regulator 0.66 BPHYT_RS12285 isocitrate lyase low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF2181 Transcriptional regulator, TetR family 0.55 GFF4147 Isocitrate lyase (EC 4.1.3.1) low > 90
Paraburkholderia graminis OAS925 0.37 ABIE53_001425 AcrR family transcriptional regulator 0.66 ABIE53_002536 isocitrate lyase low > 113
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS24550 TetR family transcriptional regulator 0.65 QEN71_RS06270 isocitrate lyase low > 153
Ralstonia solanacearum PSI07 0.36 RPSI07_RS19255 TetR/AcrR family transcriptional regulator 0.65 RPSI07_RS17335 isocitrate lyase low > 81
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_00295 transcriptional regulator, TetR family 0.65 H281DRAFT_00580 isocitrate lyase low > 103
Ralstonia solanacearum GMI1000 0.35 RS_RS04985 TetR/AcrR family transcriptional regulator 0.66 RS_RS06810 isocitrate lyase low > 80
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS09925 TetR/AcrR family transcriptional regulator 0.65 ABZR87_RS11590 isocitrate lyase low > 80
Escherichia coli Nissle 1917 0.28 ECOLIN_RS24435 TetR/AcrR family transcriptional regulator 0.58 ECOLIN_RS26870 isocitrate lyase — —
Escherichia coli ECOR38 0.28 HEPCGN_10290 acrR TetR/AcrR family transcriptional regulator 0.58 HEPCGN_11905 aceA isocitrate lyase low > 85
Escherichia fergusonii Becca 0.28 EFB2_04323 HTH-type transcriptional repressor NicS 0.58 EFB2_04595 Isocitrate lyase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.28 OHPLBJKB_03830 HTH-type transcriptional repressor NicS 0.58 OHPLBJKB_04035 Isocitrate lyase 0.58 70
Pontibacter actiniarum KMM 6156, DSM 19842 0.12 CA264_07185 TetR family transcriptional regulator 0.60 CA264_09255 isocitrate lyase low > 74

Not shown: 2 genomes with orthologs for Atu3115 only; 60 genomes with orthologs for Atu0607 only