Conservation of cofitness between Sama_0255 and Sama_2124 in Shewanella amazonensis SB2B

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_0255 acetylornithine deacetylase (RefSeq) 1.0 Sama_2124 pseudouridine synthase, Rsu (RefSeq) 0.45 12
Shewanella loihica PV-4 0.76 Shew_0201 acetylornithine deacetylase (RefSeq) 0.83 Shew_2246 pseudouridine synthase (RefSeq) low > 60
Enterobacter sp. TBS_079 0.58 MPMX20_04523 Acetylornithine deacetylase 0.63 MPMX20_02507 Ribosomal large subunit pseudouridine synthase B low > 85
Escherichia coli ECOR27 0.58 NOLOHH_05735 argE acetylornithine deacetylase 0.63 NOLOHH_20295 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 75
Escherichia coli BW25113 0.58 b3957 argE acetylornithine deacetylase (NCBI) 0.63 b1269 rluB 23S rRNA pseudouridylate synthase (NCBI) low > 76
Escherichia fergusonii Becca 0.58 EFB2_04657 Acetylornithine deacetylase 0.63 EFB2_02658 Ribosomal large subunit pseudouridine synthase B low > 86
Escherichia coli Nissle 1917 0.58 ECOLIN_RS22840 acetylornithine deacetylase 0.63 ECOLIN_RS07635 23S rRNA pseudouridine(2605) synthase RluB low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.58 OHPLBJKB_04093 Acetylornithine deacetylase 0.63 OHPLBJKB_02415 Ribosomal large subunit pseudouridine synthase B low > 73
Escherichia coli BL21 0.58 ECD_03842 acetylornithine deacetylase 0.63 ECD_01245 23S rRNA pseudouridine(2605) synthase low > 61
Enterobacter asburiae PDN3 0.58 EX28DRAFT_4419 acetylornithine deacetylase (ArgE) 0.63 EX28DRAFT_0940 pseudouridine synthase low > 76
Escherichia coli ECOR38 0.58 HEPCGN_12235 argE acetylornithine deacetylase 0.63 HEPCGN_25560 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF2343 Acetylornithine deacetylase (EC 3.5.1.16) 0.62 GFF2719 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) low > 78
Escherichia coli ECRC62 0.57 BNILDI_05790 argE acetylornithine deacetylase 0.63 BNILDI_18445 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 75
Escherichia coli ECRC101 0.57 MCAODC_04090 argE acetylornithine deacetylase 0.63 MCAODC_15635 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 87
Escherichia coli ECRC102 0.57 NIAGMN_11340 argE acetylornithine deacetylase 0.63 NIAGMN_26800 rluB 23S rRNA pseudouridine(2605) synthase RluB — —
Escherichia coli ECRC98 0.57 JDDGAC_17215 argE acetylornithine deacetylase 0.63 JDDGAC_05175 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 86
Escherichia coli ECRC100 0.57 OKFHMN_13590 argE acetylornithine deacetylase 0.63 OKFHMN_02630 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 80
Pectobacterium carotovorum WPP14 0.57 HER17_RS20635 acetylornithine deacetylase 0.63 HER17_RS10900 23S rRNA pseudouridine(2605) synthase RluB low > 75
Escherichia coli ECRC99 0.57 KEDOAH_14570 argE acetylornithine deacetylase 0.63 KEDOAH_26135 rluB 23S rRNA pseudouridine(2605) synthase RluB — —
Serratia liquefaciens MT49 0.57 IAI46_24520 acetylornithine deacetylase 0.63 IAI46_13995 23S rRNA pseudouridine(2605) synthase RluB low > 86
Klebsiella michiganensis M5al 0.57 BWI76_RS00840 acetylornithine deacetylase 0.63 BWI76_RS11880 23S rRNA pseudouridylate synthase B low > 92
Dickeya dianthicola ME23 0.56 DZA65_RS00930 acetylornithine deacetylase 0.62 DZA65_RS10980 23S rRNA pseudouridine(2605) synthase RluB low > 75
Dickeya dianthicola 67-19 0.56 HGI48_RS00870 acetylornithine deacetylase 0.62 HGI48_RS10500 23S rRNA pseudouridine(2605) synthase RluB low > 71
Dickeya dadantii 3937 0.56 DDA3937_RS20355 acetylornithine deacetylase 0.62 DDA3937_RS10500 23S rRNA pseudouridine(2605) synthase RluB low > 74
Pantoea sp. MT58 0.55 IAI47_00900 acetylornithine deacetylase 0.62 IAI47_09210 23S rRNA pseudouridine(2605) synthase RluB low > 76
Erwinia tracheiphila SCR3 0.55 LU632_RS19620 argE acetylornithine deacetylase 0.63 LU632_RS12730 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 74
Pseudomonas putida KT2440 0.49 PP_5186 acetylornithine deacetylase 0.50 PP_4496 23S rRNA pseudouridine 2605 synthase — —
Marinobacter adhaerens HP15 0.49 HP15_3315 acetylornithine deacetylase (ArgE) 0.50 HP15_1530 RNA-binding S4 domain protein low > 73
Vibrio cholerae E7946 ATCC 55056 0.46 CSW01_13385 acetylornithine deacetylase 0.60 CSW01_05970 23S rRNA pseudouridylate synthase B — —
Magnetospirillum magneticum AMB-1 0.23 AMB_RS11990 acetylornithine deacetylase 0.27 AMB_RS20865 rRNA pseudouridine synthase low > 64

Not shown: 45 genomes with orthologs for Sama_0255 only; 8 genomes with orthologs for Sama_2124 only