Conservation of cofitness between Sama_0176 and Sama_1133 in Shewanella amazonensis SB2B

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_0176 general secretion pathway protein K (RefSeq) 1.0 Sama_1133 PTS system, glucose-specific IIBC component (RefSeq) 0.49 13
Shewanella sp. ANA-3 0.76 Shewana3_0158 general secretion pathway protein K (RefSeq) 0.69 Shewana3_2822 PTS system, glucose-like IIB subunint (RefSeq) low > 73
Shewanella oneidensis MR-1 0.76 SO0173 gspK general secretion pathway protein K (NCBI ptt file) 0.73 SO1623 ptsG PTS system, glucose-specific IIBC component (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.74 Shew_3612 general secretion pathway protein K (RefSeq) 0.70 Shew_2641 PTS system, glucose-like IIB subunint (RefSeq) low > 60
Dickeya dianthicola 67-19 0.30 HGI48_RS14700 type II secretion system minor pseudopilin GspK 0.42 HGI48_RS13145 PTS glucose transporter subunit IIBC low > 71
Dickeya dadantii 3937 0.30 DDA3937_RS14765 type II secretion system minor pseudopilin GspK 0.42 DDA3937_RS13080 PTS glucose transporter subunit IIBC low > 74
Dickeya dianthicola ME23 0.29 DZA65_RS15645 type II secretion system minor pseudopilin GspK 0.42 DZA65_RS13615 PTS glucose transporter subunit IIBC low > 75
Pectobacterium carotovorum WPP14 0.29 HER17_RS06720 type II secretion system minor pseudopilin GspK 0.42 HER17_RS08690 PTS glucose transporter subunit IIBC low > 75
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_00179 type II secretion pathway protein K 0.22 CCNA_00572 PTS system, N-acetylglucosamine-specific IIBC component low > 67
Caulobacter crescentus NA1000 0.27 CCNA_00179 type II secretion pathway protein K 0.22 CCNA_00572 PTS system, N-acetylglucosamine-specific IIBC component — —
Vibrio cholerae E7946 ATCC 55056 0.26 CSW01_13755 type II secretion system protein K 0.40 CSW01_10055 PTS glucose transporter subunit IIBC — —
Escherichia coli BL21 0.26 ECD_02831 putative type II secretion protein GspK 0.45 ECD_01097 fused glucose-specific PTS enzymes: IIB component/IIC component low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.25 OHPLBJKB_00746 Putative type II secretion system protein K 0.45 OHPLBJKB_02565 PTS system glucose-specific EIICB component low > 73
Escherichia fergusonii Becca 0.24 EFB2_00852 Putative type II secretion system protein K 0.45 EFB2_02874 PTS system glucose-specific EIICB component low > 86
Escherichia coli ECOR38 0.24 HEPCGN_18085 gspK general secretion pathway protein K 0.45 HEPCGN_23945 ptsG PTS glucose transporter subunit IIBC 0.83 13
Escherichia coli ECOR27 0.24 NOLOHH_11010 gspK general secretion pathway protein K 0.45 NOLOHH_21065 ptsG PTS glucose transporter subunit IIBC low > 57
Escherichia coli ECRC102 0.22 NIAGMN_28570 gspK type II secretion system minor pseudopilin GspK 0.45 NIAGMN_24295 ptsG PTS glucose transporter subunit IIBC — —
Escherichia coli ECRC98 0.22 JDDGAC_30330 gspK type II secretion system minor pseudopilin GspK 0.45 JDDGAC_07195 ptsG PTS glucose transporter subunit IIBC — —
Escherichia coli ECRC101 0.22 MCAODC_15300 gspK type II secretion system minor pseudopilin GspK 0.45 MCAODC_22895 ptsG PTS glucose transporter subunit IIBC — —
Escherichia coli ECRC101 0.22 OKFHMN_00250 gspK type II secretion system minor pseudopilin GspK 0.45 OKFHMN_03535 ptsG PTS glucose transporter subunit IIBC — —
Klebsiella michiganensis M5al 0.20 BWI76_RS05055 type II secretion system protein K 0.44 BWI76_RS11130 PTS glucose transporter subunit IIBC low > 92
Escherichia coli BW25113 0.19 b3332 gspK general secretory pathway component, cryptic (NCBI) 0.45 b1101 ptsG fused glucose-specific PTS enzymes: IIB component/IIC component (NCBI) low > 76
Rahnella sp. WP5 0.16 EX31_RS16200 type II secretion system minor pseudopilin GspK 0.44 EX31_RS24475 PTS glucose transporter subunit IIBC low > 89
Enterobacter asburiae PDN3 0.15 EX28DRAFT_2072 Type II secretory pathway, component PulK 0.44 EX28DRAFT_1828 PTS system, glucose-specific IIBC component low > 76

Not shown: 16 genomes with orthologs for Sama_0176 only; 12 genomes with orthologs for Sama_1133 only