Conservation of cofitness between Sama_0168 and Sama_0899 in Shewanella amazonensis SB2B

16 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_0168 general secretion pathway protein C (RefSeq) 1.0 Sama_0899 ribosomal subunit interface protein (RefSeq) 0.43 19
Shewanella oneidensis MR-1 0.66 SO0165 gspC general secretion pathway protein C (NCBI ptt file) 0.70 SO3422 yfiA-2 ribosomal subunit interface protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.65 Shewana3_0150 general secretion pathway protein C (RefSeq) 0.75 Shewana3_1133 SSU ribosomal protein S30P / sigma 54 modulation protein (RefSeq) low > 73
Shewanella loihica PV-4 0.58 Shew_3620 general secretion pathway protein C (RefSeq) 0.68 Shew_1073 sigma 54 modulation protein/ribosomal protein S30EA (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.28 CSW01_13795 type II secretion system protein GspC 0.36 CSW01_03685 ribosomal subunit interface protein low > 62
Klebsiella michiganensis M5al 0.21 BWI76_RS05095 pullulanase 0.40 BWI76_RS21460 translation inhibitor protein RaiA low > 92
Pectobacterium carotovorum WPP14 0.20 HER17_RS06680 type II secretion system protein GspC 0.39 HER17_RS05390 ribosome-associated translation inhibitor RaiA low > 75
Escherichia coli BL21 0.18 ECD_02839 putative secretion pathway protein, C-type protein 0.41 ECD_02486 cold shock protein associated with 30S ribosomal subunit low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.17 OHPLBJKB_00738 Type II secretion system protein C 0.41 OHPLBJKB_01110 Ribosome-associated inhibitor A low > 73
Escherichia fergusonii Becca 0.17 EFB2_00844 Type II secretion system protein C 2 0.41 EFB2_01294 Ribosome-associated inhibitor A low > 86
Escherichia coli Nissle 1917 0.17 ECOLIN_RS17090 type II secretion system protein GspC 0.41 ECOLIN_RS14690 ribosome-associated translation inhibitor RaiA — —
Escherichia coli ECOR38 0.17 HEPCGN_18045 gspC type II secretion system protein GspC 0.41 HEPCGN_20355 raiA ribosome-associated translation inhibitor RaiA low > 85
Escherichia coli ECOR27 0.17 NOLOHH_10970 gspC type II secretion system protein GspC 0.41 NOLOHH_12910 raiA ribosome-associated translation inhibitor RaiA low > 57
Dickeya dadantii 3937 0.16 DDA3937_RS14805 type II secretion system protein GspC 0.41 DDA3937_RS16120 ribosome-associated translation inhibitor RaiA low > 74
Dickeya dianthicola ME23 0.16 DZA65_RS15685 type II secretion system protein GspC 0.41 DZA65_RS17340 ribosome-associated translation inhibitor RaiA low > 75
Dickeya dianthicola 67-19 0.16 HGI48_RS14740 type II secretion system protein GspC 0.41 HGI48_RS16245 ribosome-associated translation inhibitor RaiA low > 71
Rahnella sp. WP5 0.12 EX31_RS16160 type II secretion system protein GspC 0.41 EX31_RS07580 ribosome-associated translation inhibitor RaiA low > 89

Not shown: 4 genomes with orthologs for Sama_0168 only; 13 genomes with orthologs for Sama_0899 only