Conservation of cofitness between Shew_2809 and Shew_1201 in Shewanella loihica PV-4

15 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_2809 alpha/beta hydrolase fold (RefSeq) 1.0 Shew_1201 rumA 23S rRNA 5-methyluridine methyltransferase (RefSeq) 0.46 3
Shewanella sp. ANA-3 0.67 Shewana3_1047 hypothetical protein (RefSeq) 0.64 Shewana3_1110 rumA 23S rRNA 5-methyluridine methyltransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.66 SO1224 conserved hypothetical protein (NCBI ptt file) 0.64 SO3456 RNA methyltransferase, TrmA family (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.60 Sama_0979 alpha/beta hydrolase fold (RefSeq) 0.59 Sama_1032 rumA 23S rRNA 5-methyluridine methyltransferase (RefSeq) low > 62
Pontibacter actiniarum KMM 6156, DSM 19842 0.33 CA264_02730 hypothetical protein 0.17 CA264_02005 23S rRNA (uracil-5-)-methyltransferase RumA low > 74
Pseudomonas segetis P6 0.17 MPMX49_02622 hypothetical protein 0.35 MPMX49_01653 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 75
Pseudomonas aeruginosa PA14 0.15 IKLFDK_08560 alpha/beta hydrolase 0.36 IKLFDK_04195 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 98
Pseudomonas aeruginosa MRSN321 0.15 DY961_RS20545 alpha/beta fold hydrolase 0.36 DY961_RS07780 rlmD;go_function=RNA 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.27 41
Pseudomonas aeruginosa PUPa3 0.15 DQ20_RS54625 alpha/beta fold hydrolase 0.36 DQ20_RS45015 rlmD;go_function=RNA 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.15 Psyr_2091 esterase/lipase/thioesterase family protein 0.34 Psyr_3696 23S rRNA m(5)U-1939 methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.15 Psyr_2091 esterase/lipase/thioesterase family protein 0.34 Psyr_3696 23S rRNA m(5)U-1939 methyltransferase low > 86
Pseudomonas sp. S08-1 0.14 OH686_01655 Esterase/lipase/thioesterase family protein 0.36 OH686_18955 23S rRNA (uracil-5-)-methyltransferase RumA 0.48 26
Pseudomonas sp. BP01 0.13 JOY50_RS22165 alpha/beta fold hydrolase 0.33 JOY50_RS23905 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 84
Pseudomonas fluorescens FW300-N2C3 0.13 AO356_02820 EstX protein 0.33 AO356_19055 23S rRNA methyltransferase low > 104
Pseudomonas sp. SVBP6 0.13 COO64_RS05375 alpha/beta fold hydrolase 0.34 COO64_RS07330 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 93
Pseudomonas fluorescens GW456-L13 0.12 PfGW456L13_4111 Esterase/lipase/thioesterase family protein 0.35 PfGW456L13_2033 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 low > 87

Not shown: 0 genomes with orthologs for Shew_2809 only; 103 genomes with orthologs for Shew_1201 only