Conservation of cofitness between BT2241 and BT3320 in Bacteroides thetaiotaomicron VPI-5482

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT2241 DNA-damage-inducible protein F (NCBI ptt file) 1.0 BT3320 dihydrodipicolinate reductase (NCBI ptt file) 0.27 9
Bacteroides ovatus ATCC 8483 0.91 BACOVA_03104 MATE efflux family protein 0.91 BACOVA_00959 dihydrodipicolinate reductase low > 94
Phocaeicola vulgatus CL09T03C04 0.77 HMPREF1058_RS13880 MATE family efflux transporter 0.86 HMPREF1058_RS11730 4-hydroxy-tetrahydrodipicolinate reductase low > 67
Phocaeicola dorei CL03T12C01 0.76 ABI39_RS09485 MATE family efflux transporter 0.86 ABI39_RS05175 4-hydroxy-tetrahydrodipicolinate reductase low > 72
Bacteroides stercoris CC31F 0.75 HMPREF1181_RS09420 MATE family efflux transporter 0.85 HMPREF1181_RS02275 4-hydroxy-tetrahydrodipicolinate reductase low > 56
Parabacteroides merdae CL09T00C40 0.68 HMPREF1078_RS15090 MATE family efflux transporter 0.60 HMPREF1078_RS05545 4-hydroxy-tetrahydrodipicolinate reductase low > 61
Kangiella aquimarina DSM 16071 0.27 B158DRAFT_0674 putative efflux protein, MATE family 0.12 B158DRAFT_0614 dihydrodipicolinate reductase (EC 1.3.1.26) — —
Shewanella oneidensis MR-1 0.27 SO4617 dinF DNA-damage-inducible protein F (NCBI ptt file) 0.13 SO_1140 dapB dihydrodipicolinate reductase (RefSeq) — —
Enterobacter sp. TBS_079 0.26 MPMX20_00260 DNA damage-inducible protein F 0.15 MPMX20_00738 4-hydroxy-tetrahydrodipicolinate reductase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.26 GFF1413 DNA-damage-inducible protein F 0.16 GFF216 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) — —
Escherichia coli BW25113 0.26 b4044 dinF DNA-damage-inducible SOS response protein (NCBI) 0.16 b0031 dapB dihydrodipicolinate reductase (NCBI) — —
Shewanella sp. ANA-3 0.26 Shewana3_4001 MATE efflux family protein (RefSeq) 0.13 Shewana3_0966 dihydrodipicolinate reductase (RefSeq) — —
Escherichia coli BL21 0.26 ECD_03916 oxidative stress resistance protein; putative MATE family efflux pump; UV and mitomycin C inducible protein 0.15 ECD_00035 dihydrodipicolinate reductase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.26 OHPLBJKB_03999 DNA damage-inducible protein F 0.15 OHPLBJKB_03626 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia coli ECOR27 0.26 NOLOHH_05215 dinF MATE family efflux transporter DinF 0.15 NOLOHH_03285 dapB 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia coli ECRC62 0.26 BNILDI_06305 dinF MATE family efflux transporter DinF 0.16 BNILDI_08315 dapB 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia fergusonii Becca 0.25 EFB2_04559 DNA damage-inducible protein F 0.16 EFB2_04014 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia coli Nissle 1917 0.25 ECOLIN_RS23340 MATE family efflux transporter DinF 0.16 ECOLIN_RS00160 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia coli ECRC99 0.25 KEDOAH_15100 dinF MATE family efflux transporter DinF 0.16 KEDOAH_17200 dapB 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia coli ECRC101 0.25 MCAODC_03560 dinF MATE family efflux transporter DinF 0.16 MCAODC_01470 dapB 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia coli ECRC102 0.25 NIAGMN_10810 dinF MATE family efflux transporter DinF 0.16 NIAGMN_08805 dapB 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia coli ECRC101 0.25 OKFHMN_13060 dinF MATE family efflux transporter DinF 0.16 OKFHMN_10955 dapB 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia coli ECRC98 0.25 JDDGAC_16685 dinF MATE family efflux transporter DinF 0.16 JDDGAC_14550 dapB 4-hydroxy-tetrahydrodipicolinate reductase — —
Rhizobium sp. OAE497 0.25 ABIE40_RS02425 MATE family efflux transporter 0.14 ABIE40_RS13905 4-hydroxy-tetrahydrodipicolinate reductase low > 107
Escherichia coli ECOR38 0.25 HEPCGN_11580 dinF MATE family efflux transporter DinF 0.16 HEPCGN_08940 dapB 4-hydroxy-tetrahydrodipicolinate reductase — —
Pseudomonas sp. S08-1 0.21 OH686_07530 MATE efflux family protein 0.18 OH686_17070 4-hydroxy-tetrahydrodipicolinate reductase — —
Mycobacterium tuberculosis H37Rv 0.06 Rv2836c Possible DNA-damage-inducible protein F DinF 0.16 Rv2773c Dihydrodipicolinate reductase DapB (DHPR) — —

Not shown: 37 genomes with orthologs for BT2241 only; 16 genomes with orthologs for BT3320 only