Conservation of cofitness between BT0252 and BT3266 in Bacteroides thetaiotaomicron VPI-5482

18 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT0252 transcription-repair coupling factor (NCBI ptt file) 1.0 BT3266 excinuclease ABC subunit C (NCBI ptt file) 0.54 1
Bacteroides ovatus ATCC 8483 0.95 BACOVA_00401 transcription-repair coupling factor 0.95 BACOVA_01365 excinuclease ABC, C subunit low > 94
Bacteroides stercoris CC31F 0.87 HMPREF1181_RS04640 transcription-repair coupling factor 0.86 HMPREF1181_RS02095 excinuclease ABC subunit UvrC low > 56
Phocaeicola vulgatus CL09T03C04 0.79 HMPREF1058_RS15450 transcription-repair coupling factor 0.82 HMPREF1058_RS11525 excinuclease ABC subunit UvrC low > 67
Phocaeicola dorei CL03T12C01 0.79 ABI39_RS11420 transcription-repair coupling factor 0.82 ABI39_RS05415 excinuclease ABC subunit UvrC low > 72
Parabacteroides merdae CL09T00C40 0.67 HMPREF1078_RS02110 transcription-repair coupling factor 0.73 HMPREF1078_RS06310 excinuclease ABC subunit UvrC low > 61
Mucilaginibacter yixingensis YX-36 DSM 26809 0.48 ABZR88_RS21080 transcription-repair coupling factor 0.47 ABZR88_RS04150 excinuclease ABC subunit UvrC low > 71
Echinicola vietnamensis KMM 6221, DSM 17526 0.47 Echvi_1312 transcription-repair coupling factor (mfd) 0.43 Echvi_0619 excinuclease ABC, C subunit 0.44 6
Pontibacter actiniarum KMM 6156, DSM 19842 0.46 CA264_15820 transcription-repair coupling factor 0.43 CA264_16350 excinuclease ABC subunit C 0.39 56
Pedobacter sp. GW460-11-11-14-LB5 0.46 CA265_RS21070 transcription-repair coupling factor 0.46 CA265_RS18110 excinuclease ABC subunit C 0.40 11
Synechococcus elongatus PCC 7942 0.27 Synpcc7942_1326 mfd transcription-repair coupling factor 0.22 Synpcc7942_1945 uvrC excinuclease ABC subunit C low > 38
Magnetospirillum magneticum AMB-1 0.25 AMB_RS12390 transcription-repair coupling factor 0.24 AMB_RS19240 UvrABC system protein C low > 64
Dechlorosoma suillum PS 0.24 Dsui_2385 transcription-repair coupling factor Mfd 0.25 Dsui_2470 excinuclease ABC, C subunit 0.88 7
Phaeobacter inhibens DSM 17395 0.24 PGA1_c14920 transcription-repair-coupling factor Mfd 0.25 PGA1_c02880 uvrABC system protein C low > 62
Variovorax sp. OAS795 0.24 ABID97_RS17285 transcription-repair coupling factor 0.25 ABID97_RS10635 excinuclease ABC subunit UvrC low > 91
Shewanella loihica PV-4 0.22 Shew_1630 transcription-repair coupling factor (RefSeq) 0.25 Shew_1825 uvrC excinuclease ABC subunit C (RefSeq) 0.61 7
Variovorax sp. SCN45 0.22 GFF412 Transcription-repair coupling factor 0.24 GFF2859 Excinuclease ABC subunit C low > 127
Brevundimonas sp. GW460-12-10-14-LB2 0.22 A4249_RS04775 transcription-repair coupling factor 0.23 A4249_RS01670 excinuclease ABC subunit UvrC low > 48
Rhizobium sp. OAE497 0.22 ABIE40_RS09310 transcription-repair coupling factor 0.23 ABIE40_RS06500 excinuclease ABC subunit UvrC — —

Not shown: 2 genomes with orthologs for BT0252 only; 71 genomes with orthologs for BT3266 only