Conservation of cofitness between b2616 and b3651 in Escherichia coli BW25113

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2616 recN recombination and repair protein (NCBI) 1.0 b3651 trmH tRNA (Guanosine-2'-O-)-methyltransferase (NCBI) 0.46 12
Escherichia coli ECOR27 1.00 NOLOHH_12815 recN DNA repair protein RecN 1.00 NOLOHH_07430 trmH tRNA (guanosine(18)-2'-O)-methyltransferase TrmH low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01091 DNA repair protein RecN 0.95 OHPLBJKB_00050 'tRNA (guanosine(18)-2'-O)-methyltransferase' transl_table=11 low > 73
Escherichia coli ECRC62 1.00 BNILDI_11620 recN DNA repair protein RecN 1.00 BNILDI_04085 trmH tRNA (guanosine(18)-2'-O)-methyltransferase TrmH — —
Escherichia coli BL21 1.00 ECD_02504 recombination and repair protein 1.00 ECD_03508 tRNA mG18-2'-O-methyltransferase, SAM-dependent low > 60
Escherichia coli ECRC101 0.99 OKFHMN_21145 recN DNA repair protein RecN 0.95 OKFHMN_15550 recG ATP-dependent DNA helicase RecG — —
Escherichia coli ECRC99 0.99 KEDOAH_07075 recN DNA repair protein RecN 0.95 KEDOAH_12595 recG ATP-dependent DNA helicase RecG — —
Escherichia coli ECRC102 0.99 NIAGMN_18915 recN DNA repair protein RecN 0.95 NIAGMN_13310 recG ATP-dependent DNA helicase RecG — —
Escherichia coli ECRC101 0.99 MCAODC_11670 recN DNA repair protein RecN 0.95 MCAODC_06060 recG ATP-dependent DNA helicase RecG — —
Escherichia coli ECOR38 0.99 HEPCGN_20265 recN DNA repair protein RecN 0.99 HEPCGN_14370 trmH tRNA (guanosine(18)-2'-O)-methyltransferase TrmH low > 85
Escherichia fergusonii Becca 0.99 EFB2_01277 DNA repair protein RecN 1.00 EFB2_00137 tRNA (guanosine(18)-2'-O)-methyltransferase low > 86
Escherichia coli ECRC98 0.99 JDDGAC_24810 recN DNA repair protein RecN 1.00 JDDGAC_19175 trmH tRNA (guanosine(18)-2'-O)-methyltransferase TrmH — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14775 DNA repair protein RecN 1.00 ECOLIN_RS20795 tRNA (guanosine(18)-2'-O)-methyltransferase TrmH low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF4162 DNA repair protein RecN 0.96 GFF356 'tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)' transl_table=11 low > 78
Enterobacter asburiae PDN3 0.86 EX28DRAFT_2719 DNA repair protein RecN 0.83 EX28DRAFT_3900 SpoU rRNA Methylase family/SpoU, rRNA methylase, C-terminal 0.45 55
Enterobacter sp. TBS_079 0.85 MPMX20_03486 DNA repair protein RecN 0.90 MPMX20_00085 tRNA (guanosine(18)-2'-O)-methyltransferase 0.18 73
Klebsiella michiganensis M5al 0.84 BWI76_RS21560 DNA repair protein RecN 0.93 BWI76_RS27435 tRNA (guanosine(18)-2'-O)-methyltransferase TrmH low > 92
Serratia liquefaciens MT49 0.77 IAI46_19635 DNA repair protein RecN 0.85 IAI46_24900 tRNA (guanosine(18)-2'-O)-methyltransferase TrmH 0.43 38
Pantoea sp. MT58 0.77 IAI47_04810 DNA repair protein RecN 0.80 IAI47_00505 tRNA (guanosine(18)-2'-O)-methyltransferase TrmH low > 76
Rahnella sp. WP5 0.75 EX31_RS21760 DNA repair protein RecN 0.80 EX31_RS15815 tRNA (guanosine(18)-2'-O)-methyltransferase TrmH low > 89
Dickeya dadantii 3937 0.73 DDA3937_RS04325 DNA repair protein RecN 0.79 DDA3937_RS00175 tRNA (guanosine(18)-2'-O)-methyltransferase TrmH low > 74
Erwinia tracheiphila SCR3 0.73 LU632_RS16985 recN DNA repair protein RecN 0.83 LU632_RS22195 trmH tRNA (guanosine(18)-2'-O)-methyltransferase TrmH low > 74
Dickeya dianthicola 67-19 0.72 HGI48_RS04320 DNA repair protein RecN 0.78 HGI48_RS21185 tRNA (guanosine(18)-2'-O)-methyltransferase TrmH low > 71
Dickeya dianthicola ME23 0.72 DZA65_RS04235 DNA repair protein RecN 0.78 DZA65_RS22155 tRNA (guanosine(18)-2'-O)-methyltransferase TrmH low > 75
Pectobacterium carotovorum WPP14 0.72 HER17_RS17420 DNA repair protein RecN 0.81 HER17_RS21390 tRNA (guanosine(18)-2'-O)-methyltransferase TrmH low > 75
Shewanella amazonensis SB2B 0.54 Sama_1026 recombination and repair protein (RefSeq) 0.58 Sama_0262 tRNA guanosine-2'-O-methyltransferase (RefSeq) low > 62
Shewanella loihica PV-4 0.53 Shew_1196 recombination and repair protein (RefSeq) 0.59 Shew_3501 tRNA guanosine-2'-O-methyltransferase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.43 MIT1002_01443 Recombination protein N 0.61 MIT1002_00110 tRNA (guanosine(18)-2'-O)-methyltransferase low > 70
Marinobacter adhaerens HP15 0.40 HP15_3084 DNA repair protein RecN 0.44 HP15_2465 tRNA guanosine-2'-O-methyltransferase low > 73
Kangiella aquimarina DSM 16071 0.37 B158DRAFT_0601 DNA replication and repair protein RecN 0.51 B158DRAFT_0572 rRNA methylases low > 40
Echinicola vietnamensis KMM 6221, DSM 17526 0.23 Echvi_2067 DNA repair protein RecN 0.21 Echvi_3316 rRNA methylases low > 79

Not shown: 69 genomes with orthologs for b2616 only; 0 genomes with orthologs for b3651 only