Conservation of cofitness between b3565 and b3355 in Escherichia coli BW25113

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3565 xylA xylose isomerase (NCBI) 1.0 b3355 prkB predicted phosphoribulokinase (NCBI) 0.19 7
Escherichia coli Nissle 1917 1.00 ECOLIN_RS20390 xylose isomerase 1.00 ECOLIN_RS19215 phosphoribulokinase low > 52
Escherichia fergusonii Becca 1.00 EFB2_00242 Xylose isomerase 1.00 EFB2_00467 Phosphoribulokinase, plasmid low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00139 Xylose isomerase 1.00 OHPLBJKB_00347 Phosphoribulokinase, plasmid low > 73
Escherichia coli ECOR38 1.00 HEPCGN_14840 xylA xylose isomerase 1.00 HEPCGN_16075 prkB phosphoribulokinase low > 85
Escherichia coli ECOR27 1.00 NOLOHH_07900 xylA xylose isomerase 1.00 NOLOHH_09050 prkB phosphoribulokinase low > 57
Escherichia coli BL21 1.00 ECD_03417 D-xylose isomerase 1.00 ECD_03206 putative phosphoribulokinase low > 60
Escherichia coli ECRC62 1.00 BNILDI_03645 xylA xylose isomerase 1.00 BNILDI_02470 prkB phosphoribulokinase — —
Escherichia coli ECRC98 0.99 JDDGAC_19585 xylA xylose isomerase 1.00 JDDGAC_20880 prkB phosphoribulokinase — —
Escherichia coli ECRC101 0.99 OKFHMN_15955 xylA xylose isomerase 1.00 OKFHMN_17250 prkB phosphoribulokinase — —
Escherichia coli ECRC99 0.99 KEDOAH_12195 xylA xylose isomerase 1.00 KEDOAH_10890 prkB phosphoribulokinase — —
Escherichia coli ECRC101 0.99 MCAODC_06470 xylA xylose isomerase 1.00 MCAODC_07780 prkB phosphoribulokinase — —
Escherichia coli ECRC102 0.99 NIAGMN_13715 xylA xylose isomerase 1.00 NIAGMN_15020 prkB phosphoribulokinase — —
Enterobacter sp. TBS_079 0.94 MPMX20_00165 Xylose isomerase 0.94 MPMX20_04258 Phosphoribulokinase, plasmid low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF444 Xylose isomerase (EC 5.3.1.5) 0.98 GFF3714 Phosphoribulokinase (EC 2.7.1.19) homolog, function unknown low > 78
Enterobacter asburiae PDN3 0.93 EX28DRAFT_3830 xylose isomerase 0.94 EX28DRAFT_4174 Phosphoribulokinase low > 76
Klebsiella michiganensis M5al 0.93 BWI76_RS27025 Xylose isomerase (EC 5.3.1.5) (from data) 0.96 BWI76_RS25975 phosphoribulokinase low > 92
Serratia liquefaciens MT49 0.87 IAI46_00280 xylose isomerase 0.90 IAI46_23570 phosphoribulokinase low > 86
Rahnella sp. WP5 0.87 EX31_RS09765 xylose isomerase 0.88 EX31_RS04610 phosphoribulokinase low > 89
Dickeya dadantii 3937 0.85 DDA3937_RS20935 xylose isomerase 0.87 DDA3937_RS19435 phosphoribulokinase low > 74
Pantoea sp. MT58 0.85 IAI47_00195 xylose isomerase 0.91 IAI47_01975 phosphoribulokinase low > 76
Dickeya dianthicola ME23 0.85 DZA65_RS00310 xylose isomerase 0.87 DZA65_RS20640 phosphoribulokinase low > 75
Pectobacterium carotovorum WPP14 0.85 HER17_RS21085 xylose isomerase 0.89 HER17_RS01925 phosphoribulokinase low > 75
Dickeya dianthicola 67-19 0.84 HGI48_RS00310 xylose isomerase 0.88 HGI48_RS19555 phosphoribulokinase low > 71
Paraburkholderia sabiae LMG 24235 0.69 QEN71_RS25875 xylose isomerase 0.59 QEN71_RS32780 phosphoribulokinase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.69 H281DRAFT_03876 D-xylose isomerase 0.56 H281DRAFT_01313 phosphoribulokinase low > 103
Paraburkholderia graminis OAS925 0.68 ABIE53_004929 xylose isomerase 0.55 ABIE53_005500 phosphoribulokinase low > 113
Sinorhizobium meliloti 1021 0.62 SMc03163 Xylose isomerase (EC 5.3.1.5) (from data) 0.53 SM_b20201 phosphoribulokinase low > 103
Azospirillum sp. SherDot2 0.60 MPMX19_03029 Xylose isomerase 0.56 MPMX19_02943 Phosphoribulokinase, chromosomal low > 112

Not shown: 27 genomes with orthologs for b3565 only; 14 genomes with orthologs for b3355 only