Conservation of cofitness between b4235 and b3037 in Escherichia coli BW25113

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b4235 pmbA predicted peptidase required for the maturation and secretion of the antibiotic peptide MccB17 (NCBI) 1.0 b3037 ygiB conserved outer membrane protein (RefSeq) 0.29 11
Escherichia coli ECRC102 1.00 NIAGMN_09775 pmbA metalloprotease PmbA 1.00 NIAGMN_16565 ygiB DUF1190 domain-containing protein — —
Escherichia coli ECRC98 1.00 JDDGAC_15565 pmbA metalloprotease PmbA 1.00 JDDGAC_22435 ygiB DUF1190 domain-containing protein — —
Escherichia coli ECRC101 1.00 OKFHMN_11925 pmbA metalloprotease PmbA 1.00 OKFHMN_18800 ygiB DUF1190 domain-containing protein — —
Escherichia coli ECRC99 1.00 KEDOAH_16230 pmbA metalloprotease PmbA 1.00 KEDOAH_09345 ygiB DUF1190 domain-containing protein — —
Escherichia coli ECOR38 1.00 HEPCGN_10125 pmbA metalloprotease PmbA 1.00 HEPCGN_17675 ygiB DUF1190 domain-containing protein low > 85
Escherichia coli ECRC62 1.00 BNILDI_07325 pmbA metalloprotease PmbA 1.00 BNILDI_00910 ygiB DUF1190 domain-containing protein — —
Escherichia coli ECOR27 1.00 NOLOHH_04185 pmbA metalloprotease PmbA 1.00 NOLOHH_10605 ygiB DUF1190 domain-containing protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03800 Metalloprotease PmbA 1.00 OHPLBJKB_00667 hypothetical protein low > 73
Escherichia coli ECRC101 1.00 MCAODC_02430 pmbA metalloprotease PmbA 1.00 MCAODC_09315 ygiB DUF1190 domain-containing protein — —
Escherichia coli BL21 1.00 ECD_04103 putative antibiotic peptide MccB17 maturation peptidase 1.00 ECD_02909 DUF1190 family protein low > 60
Escherichia fergusonii Becca 0.99 EFB2_04298 Metalloprotease PmbA 1.00 EFB2_00772 hypothetical protein low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS24570 metalloprotease PmbA 1.00 ECOLIN_RS17525 DUF1190 family protein — —
Enterobacter sp. TBS_079 0.97 MPMX20_00517 Metalloprotease PmbA 0.87 MPMX20_03883 hypothetical protein low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF904 TldE protein, part of TldE/TldD proteolytic complex 0.97 GFF3150 UPF0441 protein ygiB low > 78
Enterobacter asburiae PDN3 0.96 EX28DRAFT_3422 Predicted Zn-dependent proteases and their inactivated homologs 0.86 EX28DRAFT_3074 Predicted integral membrane protein low > 76
Klebsiella michiganensis M5al 0.94 BWI76_RS02850 metalloprotease PmbA 0.79 BWI76_RS24405 hypothetical protein low > 92
Serratia liquefaciens MT49 0.86 IAI46_22575 metalloprotease PmbA 0.63 IAI46_21980 DUF1190 family protein low > 86
Rahnella sp. WP5 0.85 EX31_RS12320 metalloprotease PmbA 0.64 EX31_RS08105 DUF1190 family protein low > 89
Pectobacterium carotovorum WPP14 0.84 HER17_RS20090 metalloprotease PmbA 0.63 HER17_RS19830 DUF1190 family protein low > 75
Pantoea sp. MT58 0.84 IAI47_02765 metalloprotease PmbA 0.69 IAI47_03130 DUF1190 family protein low > 76
Erwinia tracheiphila SCR3 0.81 LU632_RS02145 pmbA metalloprotease PmbA 0.77 LU632_RS20640 DUF1190 family protein low > 74
Dickeya dadantii 3937 0.81 DDA3937_RS01500 metalloprotease PmbA 0.56 DDA3937_RS01735 DUF1190 family protein low > 74
Dickeya dianthicola 67-19 0.81 HGI48_RS01415 metalloprotease PmbA 0.57 HGI48_RS01630 DUF1190 family protein low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS01480 metalloprotease PmbA 0.57 DZA65_RS01705 DUF1190 family protein low > 75
Alteromonas macleodii MIT1002 0.54 MIT1002_00230 peptidase PmbA 0.28 MIT1002_02821 hypothetical protein low > 70
Xanthomonas campestris pv. campestris strain 8004 0.45 Xcc-8004.1885.1 TldE protein, part of TldE/TldD proteolytic complex 0.15 Xcc-8004.1623.1 probable lipoprotein low > 74
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_10260 pmbA metalloprotease PmbA 0.13 OKGIIK_16725 ygiB DUF1190 domain-containing protein low > 52
Rhodanobacter denitrificans MT42 0.44 LRK55_RS03125 metalloprotease PmbA 0.15 LRK55_RS06650 DUF1190 domain-containing protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS03375 metalloprotease PmbA 0.15 LRK54_RS06905 DUF1190 domain-containing protein 0.74 47
Brevundimonas sp. GW460-12-10-14-LB2 0.28 A4249_RS09195 TldD/PmbA family protein 0.17 A4249_RS10480 DUF1190 domain-containing protein low > 48

Not shown: 58 genomes with orthologs for b4235 only; 1 genomes with orthologs for b3037 only