Conservation of cofitness between b3669 and b3025 in Escherichia coli BW25113

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3669 uhpA DNA-binding response regulator in two-component regulatory system wtih UhpB (NCBI) 1.0 b3025 qseB DNA-binding response regulator in two-component regulatory system with QseC (NCBI) 0.25 15
Escherichia coli ECRC101 1.00 MCAODC_05690 uhpA_G97D DNA-binding response regulator UhpA 0.99 MCAODC_09395 Transcriptional regulatory protein QseB — —
Escherichia coli ECRC99 1.00 KEDOAH_12965 uhpA_G97D DNA-binding response regulator UhpA 0.99 KEDOAH_09265 Transcriptional regulatory protein QseB — —
Escherichia coli ECOR38 1.00 HEPCGN_13905 uhpA_G97D DNA-binding response regulator UhpA 0.99 HEPCGN_17740 Quorum sensing DNA-binding response regulator in two-component regulatory system with QseC low > 85
Escherichia coli ECRC62 1.00 BNILDI_04190 uhpA_G97D DNA-binding response regulator UhpA 0.99 BNILDI_00855 Transcriptional regulatory protein QseB — —
Escherichia coli BL21 1.00 ECD_03553 response regulator in two-component regulatory system wtih UhpB 0.99 ECD_02897 quorum sensing DNA-binding response regulator in two-component regulatory system with QseC low > 60
Escherichia coli ECRC98 1.00 JDDGAC_18805 uhpA_G97D DNA-binding response regulator UhpA 0.99 JDDGAC_22515 Transcriptional regulatory protein QseB — —
Escherichia coli ECRC102 1.00 NIAGMN_12940 uhpA_G97D DNA-binding response regulator UhpA 0.99 NIAGMN_16645 Transcriptional regulatory protein QseB — —
Escherichia fergusonii Becca 1.00 EFB2_00029 Transcriptional regulatory protein UhpA 0.99 EFB2_00788 Transcriptional regulatory protein QseB low > 86
Escherichia coli ECRC101 1.00 OKFHMN_15180 uhpA_G97D DNA-binding response regulator UhpA 0.99 OKFHMN_18880 Transcriptional regulatory protein QseB — —
Escherichia coli ECOR27 1.00 NOLOHH_07335 uhpA_G97D DNA-binding response regulator UhpA 0.99 NOLOHH_10660 Transcriptional regulatory protein QseB low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00031 Transcriptional regulatory protein UhpA 0.99 OHPLBJKB_00677 Transcriptional regulatory protein QseB low > 73
Escherichia coli Nissle 1917 1.00 ECOLIN_RS21160 transcriptional regulator UhpA 0.99 ECOLIN_RS17425 quorum sensing response regulator transcription factor QseB low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.98 GFF304 Transcriptional regulatory protein UhpA 0.89 GFF3138 Two-component system response regulator QseB low > 78
Enterobacter sp. TBS_079 0.95 MPMX20_00033 Transcriptional regulatory protein UhpA 0.83 MPMX20_03863 Transcriptional regulatory protein QseB low > 85
Enterobacter asburiae PDN3 0.95 EX28DRAFT_3952 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 0.83 EX28DRAFT_3057 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 76
Dickeya dianthicola 67-19 0.94 HGI48_RS02840 transcriptional regulator UhpA 0.69 HGI48_RS21345 response regulator low > 71
Dickeya dianthicola ME23 0.94 DZA65_RS03015 transcriptional regulator UhpA 0.68 DZA65_RS22325 response regulator low > 75
Klebsiella michiganensis M5al 0.93 BWI76_RS27800 DNA-binding response regulator 0.85 BWI76_RS24335 two-component system response regulator QseB low > 92
Serratia liquefaciens MT49 0.64 IAI46_00435 transcriptional regulator UhpA 0.68 IAI46_21235 response regulator low > 86
Vibrio cholerae E7946 ATCC 55056 0.47 CSW01_17605 DNA-binding response regulator 0.41 CSW01_19595 DNA-binding response regulator low > 62
Pectobacterium carotovorum WPP14 0.44 HER17_RS14245 response regulator transcription factor 0.65 HER17_RS21560 response regulator low > 75
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS05670 response regulator transcription factor 0.43 ABZR86_RS20365 response regulator transcription factor low > 74
Rhodanobacter denitrificans FW104-10B01 0.35 LRK54_RS17955 response regulator transcription factor 0.44 LRK54_RS14145 response regulator transcription factor low > 59
Rhodanobacter denitrificans MT42 0.35 LRK55_RS17810 response regulator transcription factor 0.44 LRK55_RS13865 response regulator transcription factor low > 63
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_07345 citB DNA-binding response regulator 0.43 OKGIIK_14050 ompR DNA-binding response regulator low > 52
Pedobacter sp. GW460-11-11-14-LB5 0.29 CA265_RS24135 DNA-binding response regulator 0.33 CA265_RS15210 DNA-binding response regulator low > 88
Brevundimonas sp. GW460-12-10-14-LB2 0.20 A4249_RS15535 response regulator 0.42 A4249_RS11495 response regulator transcription factor — —

Not shown: 7 genomes with orthologs for b3669 only; 46 genomes with orthologs for b3025 only