Conservation of cofitness between b0898 and b2807 in Escherichia coli BW25113

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0898 ycaD putative MFS family transporter protein (NCBI) 1.0 b2807 ygdD conserved inner membrane protein (NCBI) 0.20 13
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02770 putative MFS-type transporter YcaD 1.00 OHPLBJKB_00924 hypothetical protein low > 73
Escherichia coli BL21 1.00 ECD_00902 putative MFS transporter, inner membrane protein 1.00 ECD_02658 UPF0382 family inner membrane protein low > 61
Escherichia coli ECRC100 1.00 OKFHMN_05525 ycaD MFS transporter 1.00 OKFHMN_20125 ygdD UPF0382 inner membrane protein YgdD low > 80
Escherichia coli ECRC101 1.00 MCAODC_24915 ycaD MFS transporter 1.00 MCAODC_10650 ygdD UPF0382 inner membrane protein YgdD low > 87
Escherichia coli ECRC102 1.00 NIAGMN_03245 ycaD MFS transporter 1.00 NIAGMN_17895 ygdD UPF0382 inner membrane protein YgdD
Escherichia coli ECRC98 1.00 JDDGAC_09335 ycaD MFS transporter 1.00 JDDGAC_23790 ygdD UPF0382 inner membrane protein YgdD low > 86
Escherichia coli ECRC99 1.00 KEDOAH_22210 ycaD MFS transporter 1.00 KEDOAH_08005 ygdD UPF0382 inner membrane protein YgdD
Escherichia coli ECOR38 1.00 HEPCGN_22985 ycaD MFS transporter 1.00 HEPCGN_19380 ygdD DUF423 domain-containing protein low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS04775 MFS transporter 1.00 ECOLIN_RS15645 DUF423 domain-containing protein low > 55
Escherichia coli ECOR27 0.98 NOLOHH_22095 ycaD MFS transporter 1.00 NOLOHH_12005 ygdD UPF0382 inner membrane protein YgdD low > 75
Escherichia coli ECRC62 0.98 BNILDI_20350 ycaD MFS transporter 1.00 BNILDI_10510 ygdD UPF0382 inner membrane protein YgdD low > 75
Escherichia fergusonii Becca 0.97 EFB2_03163 putative MFS-type transporter YcaD 1.00 EFB2_01110 hypothetical protein low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF3654 Hypothetical MFS-type transporter protein YcaD 0.93 GFF4864 COG2363 low > 78
Enterobacter sp. TBS_079 0.84 MPMX20_01559 putative MFS-type transporter YcaD 0.96 MPMX20_03670 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.83 EX28DRAFT_2035 Arabinose efflux permease 0.95 EX28DRAFT_2882 Uncharacterized small membrane protein low > 76
Klebsiella michiganensis M5al 0.78 BWI76_RS09695 MFS transporter 0.94 BWI76_RS22950 membrane protein low > 92
Pantoea sp. MT58 0.72 IAI47_12890 MFS transporter 0.79 IAI47_04030 DUF423 domain-containing protein low > 76
Erwinia tracheiphila SCR3 0.70 LU632_RS09765 MFS transporter 0.76 LU632_RS06260 DUF423 domain-containing protein low > 74
Serratia liquefaciens MT49 0.68 IAI46_08600 MFS transporter 0.82 IAI46_20335 DUF423 domain-containing protein low > 86
Rahnella sp. WP5 0.66 EX31_RS18475 MFS transporter 0.76 EX31_RS13105 DUF423 domain-containing protein low > 89
Dickeya dianthicola ME23 0.60 DZA65_RS09960 MFS transporter 0.67 DZA65_RS05395 DUF423 domain-containing protein low > 75
Dickeya dadantii 3937 0.60 DDA3937_RS09640 MFS transporter 0.72 DDA3937_RS05055 DUF423 domain-containing protein low > 74
Pectobacterium carotovorum WPP14 0.60 HER17_RS12335 MFS transporter 0.84 HER17_RS16410 DUF423 domain-containing protein low > 75
Dickeya dianthicola 67-19 0.59 HGI48_RS09650 MFS transporter 0.66 HGI48_RS05055 DUF423 domain-containing protein low > 71
Shewanella loihica PV-4 0.19 Shew_3325 major facilitator transporter (RefSeq) 0.30 Shew_2762 hypothetical protein (RefSeq)
Vibrio cholerae E7946 ATCC 55056 0.19 CSW01_17935 MFS transporter 0.22 CSW01_04595 DUF423 domain-containing protein low > 62
Pseudomonas sp. RS175 0.18 PFR28_03261 putative MFS-type transporter YcaD 0.27 PFR28_04254 hypothetical protein low > 88
Pseudomonas putida KT2440 0.18 PP_3082 putative Membrane protein 0.32 PP_5106 conserved inner membrane protein low > 96
Marinobacter adhaerens HP15 0.15 HP15_2851 transmembrane transport protein 0.25 HP15_3276 membrane protein containing DUF423
Pseudomonas sp. S08-1 0.07 OH686_13655 Uncharacterized MFS-type transporter 0.32 OH686_14275 hypothetical regulator low > 80

Not shown: 14 genomes with orthologs for b0898 only; 26 genomes with orthologs for b2807 only