Conservation of cofitness between b0871 and b2016 in Escherichia coli BW25113

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0871 poxB pyruvate dehydrogenase (NCBI) 1.0 b2016 yeeZ predicted epimerase, with NAD(P)-binding Rossmann-fold domain (NCBI) 0.30 5
Escherichia coli BL21 1.00 ECD_00876 pyruvate dehydrogenase, thiamine triphosphate-binding, FAD-binding 1.00 ECD_01919 putative epimerase low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02797 Pyruvate dehydrogenase [ubiquinone] 1.00 OHPLBJKB_01684 Protein YeeZ low > 73
Escherichia coli ECRC98 1.00 JDDGAC_09480 poxB ubiquinone-dependent pyruvate dehydrogenase 1.00 JDDGAC_28640 yeeZ Protein YeeZ — —
Escherichia coli ECRC99 1.00 KEDOAH_22065 poxB ubiquinone-dependent pyruvate dehydrogenase 1.00 KEDOAH_03620 yeeZ Protein YeeZ — —
Escherichia coli ECRC102 1.00 NIAGMN_03885 poxB ubiquinone-dependent pyruvate dehydrogenase 1.00 NIAGMN_22475 yeeZ Protein YeeZ — —
Escherichia coli ECRC101 1.00 MCAODC_25060 poxB ubiquinone-dependent pyruvate dehydrogenase 1.00 MCAODC_20410 yeeZ Protein YeeZ — —
Escherichia coli ECOR38 0.99 HEPCGN_02170 poxB ubiquinone-dependent pyruvate dehydrogenase 1.00 HEPCGN_03235 yeeZ Protein YeeZ low > 85
Escherichia coli ECOR27 0.99 NOLOHH_22240 poxB ubiquinone-dependent pyruvate dehydrogenase 1.00 NOLOHH_15855 yeeZ Protein YeeZ low > 57
Escherichia fergusonii Becca 0.99 EFB2_03190 Pyruvate dehydrogenase [ubiquinone] 1.00 EFB2_01840 Protein YeeZ low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS04635 ubiquinone-dependent pyruvate dehydrogenase 0.99 ECOLIN_RS11925 SDR family oxidoreductase — —
Escherichia coli ECRC62 0.99 BNILDI_20495 poxB ubiquinone-dependent pyruvate dehydrogenase 1.00 BNILDI_14755 yeeZ Protein YeeZ — —
Escherichia coli ECRC101 0.99 OKFHMN_05845 poxB ubiquinone-dependent pyruvate dehydrogenase 1.00 OKFHMN_24530 yeeZ Protein YeeZ — —
Enterobacter sp. TBS_079 0.94 MPMX20_01532 Pyruvate dehydrogenase [ubiquinone] 0.83 MPMX20_03000 Protein YeeZ low > 85
Enterobacter asburiae PDN3 0.94 EX28DRAFT_2062 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 0.83 EX28DRAFT_0542 Nucleoside-diphosphate-sugar epimerases low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF4911 Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2) 0.87 GFF3914 Nucleoside-diphosphate-sugar epimerases low > 78
Klebsiella michiganensis M5al 0.92 BWI76_RS09555 pyruvate oxidase 0.84 BWI76_RS18915 NAD(P)-dependent oxidoreductase low > 92
Rahnella sp. WP5 0.80 EX31_RS18600 ubiquinone-dependent pyruvate dehydrogenase 0.67 EX31_RS11430 SDR family oxidoreductase low > 89
Pantoea sp. MT58 0.80 IAI47_12970 ubiquinone-dependent pyruvate dehydrogenase 0.66 IAI47_07105 SDR family oxidoreductase low > 76
Serratia liquefaciens MT49 0.79 IAI46_08465 ubiquinone-dependent pyruvate dehydrogenase 0.66 IAI46_08225 SDR family oxidoreductase low > 86
Azospirillum brasilense Sp245 0.26 AZOBR_RS29985 pyruvate oxidase 0.12 AZOBR_RS17660 epimerase low > 97
Pseudomonas sp. RS175 0.26 PFR28_01756 Putative thiamine pyrophosphate-containing protein YdaP 0.10 PFR28_04430 hypothetical protein low > 88
Dyella japonica UNC79MFTsu3.2 0.25 ABZR86_RS02920 thiamine pyrophosphate-requiring protein 0.12 ABZR86_RS10470 NAD-dependent epimerase/dehydratase family protein low > 74
Azospirillum sp. SherDot2 0.25 MPMX19_03142 Putative thiamine pyrophosphate-containing protein YdaP 0.13 MPMX19_02719 Protein YeeZ low > 112
Sinorhizobium meliloti 1021 0.23 SM_b20095 pyruvate oxidase 0.13 SMc00405 hypothetical protein low > 103

Not shown: 17 genomes with orthologs for b0871 only; 25 genomes with orthologs for b2016 only