Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Sinorhizobium meliloti 1021 | SM_b21516 | | hypothetical protein | strong | 100 | 100 |
o | Agrobacterium fabrum C58 | Atu5196 | | hypothetical protein | insig. | 67 | 95 |
o | Rhizobium sp. OAE497 | ABIE40_RS04660 | | L,D-transpeptidase | insig. | 64 | 96 |
| Agrobacterium fabrum C58 | Atu0845 | | hypothetical protein | sig. | 63 | 95 |
| Sinorhizobium meliloti 1021 | SMc00039 | | hypothetical protein | insig. | 61 | 88 |
| Agrobacterium fabrum C58 | Atu0844 | | hypothetical protein | insig. | 54 | 86 |
| Rhizobium sp. OAE497 | ABIE40_RS04655 | | L,D-transpeptidase | insig. | 59 | 78 |
| Sinorhizobium meliloti 1021 | SMc02582 | | hypothetical protein | strong | 51 | 92 |
| Agrobacterium fabrum C58 | Atu3331 | | hypothetical protein | insig. | 55 | 85 |
| Rhizobium sp. OAE497 | ABIE40_RS19495 | | L,D-transpeptidase | strong | 50 | 89 |
| Agrobacterium fabrum C58 | Atu0048 | | hypothetical protein | strong | 54 | 69 |
| Sinorhizobium meliloti 1021 | SMc02636 | | hypothetical protein | strong | 52 | 73 |
| Bosea sp. OAE506 | ABIE41_RS22050 | | L,D-transpeptidase | sig. | 45 | 94 |
| Bosea sp. OAE506 | ABIE41_RS10175 | | L,D-transpeptidase | insig. | 52 | 68 |
| Agrobacterium fabrum C58 | Atu2336 | | hypothetical protein | insig. | 49 | 75 |
| Sinorhizobium meliloti 1021 | SMc01200 | | hypothetical protein | sig. | 50 | 65 |
| Rhizobium sp. OAE497 | ABIE40_RS05790 | | L,D-transpeptidase | insig. | 42 | 95 |
| Sinorhizobium meliloti 1021 | SMc04338 | | hypothetical protein | insig. | 49 | 65 |
| Bosea sp. OAE506 | ABIE41_RS13445 | | L,D-transpeptidase | insig. | 43 | 75 |
| Rhodopseudomonas palustris CGA009 | TX73_005880 | | L,D-transpeptidase | insig. | 47 | 74 |
| Bosea sp. OAE506 | ABIE41_RS22060 | | L,D-transpeptidase | insig. | 47 | 65 |
| Rhizobium sp. OAE497 | ABIE40_RS13175 | | L,D-transpeptidase | insig. | 49 | 67 |
| Rhodopseudomonas palustris CGA009 | TX73_021875 | | L,D-transpeptidase | insig. | 49 | 64 |
| Bosea sp. OAE506 | ABIE41_RS21100 | | L,D-transpeptidase | insig. | 53 | 57 |
| Rhodopseudomonas palustris CGA009 | TX73_024925 | | L,D-transpeptidase | insig. | 45 | 72 |
| Sinorhizobium meliloti 1021 | SMc00924 | | hypothetical protein | insig. | 47 | 65 |
| Rhodopseudomonas palustris CGA009 | TX73_018480 | | L,D-transpeptidase | insig. | 47 | 65 |
| Rhizobium sp. OAE497 | ABIE40_RS03580 | | L,D-transpeptidase | insig. | 45 | 65 |
| Rhodopseudomonas palustris CGA009 | TX73_023050 | | L,D-transpeptidase | sig. | 42 | 86 |
| Bosea sp. OAE506 | ABIE41_RS14200 | | L,D-transpeptidase | insig. | 43 | 64 |
| Rhizobium sp. OAE497 | ABIE40_RS03585 | | L,D-transpeptidase | insig. | 47 | 68 |
| Rhodopseudomonas palustris CGA009 | TX73_008305 | | L,D-transpeptidase | insig. | 53 | 53 |
| Sinorhizobium meliloti 1021 | SMc00925 | | signal peptide protein | insig. | 44 | 63 |
| Dinoroseobacter shibae DFL-12 | Dshi_3406 | | ErfK/YbiS/YcfS/YnhG family protein (RefSeq) | insig. | 44 | 65 |
| Agrobacterium fabrum C58 | Atu0669 | | hypothetical protein | insig. | 42 | 77 |
| Rhodopseudomonas palustris CGA009 | TX73_018715 | | L,D-transpeptidase family protein | no data | 46 | 65 |
| Phaeobacter inhibens DSM 17395 | PGA1_c26350 | | Uncharacterized protein conserved in bacteria | insig. | 44 | 57 |
| Dinoroseobacter shibae DFL-12 | Dshi_3607 | | ErfK/YbiS/YcfS/YnhG family protein (RefSeq) | no data | 45 | 65 |
| Dinoroseobacter shibae DFL-12 | Dshi_3945 | | ErfK/YbiS/YcfS/YnhG family protein (RefSeq) | no data | 45 | 65 |
| Dinoroseobacter shibae DFL-12 | Dshi_3598 | | ErfK/YbiS/YcfS/YnhG family protein (RefSeq) | no data | 43 | 65 |
| Dinoroseobacter shibae DFL-12 | Dshi_3936 | | ErfK/YbiS/YcfS/YnhG family protein (RefSeq) | no data | 43 | 65 |
| Dinoroseobacter shibae DFL-12 | Dshi_3595 | | ErfK/YbiS/YcfS/YnhG family protein (RefSeq) | no data | 47 | 54 |
| Dinoroseobacter shibae DFL-12 | Dshi_3933 | | ErfK/YbiS/YcfS/YnhG family protein (RefSeq) | no data | 47 | 54 |
| Bosea sp. OAE506 | ABIE41_RS08190 | | L,D-transpeptidase | insig. | 40 | 61 |
| Rhodopseudomonas palustris CGA009 | TX73_001100 | | L,D-transpeptidase | cofit | 40 | 58 |
| Rhizobium sp. OAE497 | ABIE40_RS26600 | | L,D-transpeptidase | insig. | 36 | 64 |
| Dinoroseobacter shibae DFL-12 | Dshi_3496 | | ErfK/YbiS/YcfS/YnhG family protein (RefSeq) | insig. | 31 | 54 |
| Pseudomonas putida KT2440 | PP_2320 | | conserved exported protein of unknown function | strong | 30 | 61 |
| Klebsiella michiganensis M5al | BWI76_RS16970 | | murein L,D-transpeptidase | sig. | 33 | 58 |
| Enterobacter sp. TBS_079 | MPMX20_01456 | | putative L,D-transpeptidase YbiS | sig. | 31 | 63 |
| Enterobacter asburiae PDN3 | EX28DRAFT_2148 | | Uncharacterized protein conserved in bacteria | strong | 31 | 63 |
| Pseudomonas sp. S08-1 | OH686_01780 | | L,D-transpeptidase | strong | 30 | 61 |
| Escherichia coli BL21 | ECD_00786 | | L,D-transpeptidase linking Lpp to murein | strong | 31 | 63 |
| Escherichia fergusonii Becca | EFB2_03286 | | putative L,D-transpeptidase YbiS | cofit | 31 | 63 |
| Escherichia coli ECOR27 | NOLOHH_22515 | ldtB | L,D-transpeptidase | cofit | 31 | 63 |
| Escherichia coli ECOR38 | HEPCGN_01875 | ldtB | L,D-transpeptidase | strong | 31 | 63 |
| Escherichia coli ECRC101 | OKFHMN_06165 | ldtB | L,D-transpeptidase | insig. | 31 | 63 |
| Escherichia coli ECRC101 | MCAODC_25380 | ldtB | L,D-transpeptidase | insig. | 31 | 63 |
| Escherichia coli ECRC102 | NIAGMN_04210 | ldtB | L,D-transpeptidase | insig. | 31 | 63 |
| Escherichia coli ECRC62 | BNILDI_20795 | ldtB | L,D-transpeptidase | strong | 31 | 63 |
| Escherichia coli ECRC98 | JDDGAC_09800 | ldtB | L,D-transpeptidase | no data | 31 | 63 |
| Escherichia coli ECRC99 | KEDOAH_21745 | ldtB | L,D-transpeptidase | no data | 31 | 63 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02894 | | putative L,D-transpeptidase YbiS | cofit | 31 | 63 |
| Escherichia coli Nissle 1917 | ECOLIN_RS04365 | | L,D-transpeptidase | no data | 31 | 63 |
| Escherichia coli BW25113 | b0819 | ybiS | hypothetical protein (NCBI) | strong | 31 | 63 |
| Phaeobacter inhibens DSM 17395 | PGA1_c34770 | | Uncharacterized protein conserved in bacteria | sig. | 38 | 33 |
| Dickeya dianthicola ME23 | DZA65_RS13280 | | L,D-transpeptidase family protein | insig. | 31 | 61 |
| Enterobacter asburiae PDN3 | EX28DRAFT_0563 | | Uncharacterized protein conserved in bacteria | insig. | 29 | 61 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3396 | | L,D-transpeptidase YcfS | insig. | 27 | 100 |
| Pectobacterium carotovorum WPP14 | HER17_RS08950 | | L,D-transpeptidase family protein | cofit | 34 | 54 |
| Dickeya dianthicola 67-19 | HGI48_RS12815 | | L,D-transpeptidase family protein | insig. | 32 | 59 |
| Klebsiella michiganensis M5al | BWI76_RS09030 | | transpeptidase | strong | 31 | 63 |
| Klebsiella michiganensis M5al | BWI76_RS18620 | | L,D-transpeptidase | insig. | 30 | 58 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3564 | | L,D-transpeptidase YnhG | insig. | 32 | 58 |
| Dinoroseobacter shibae DFL-12 | Dshi_3781 | | ErfK/YbiS/YcfS/YnhG family protein (RefSeq) | no data | 39 | 35 |
| Dinoroseobacter shibae DFL-12 | Dshi_4057 | | ErfK/YbiS/YcfS/YnhG family protein (RefSeq) | no data | 39 | 35 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF716 | | L,D-transpeptidase YbiS | cofit | 30 | 63 |
| Pseudomonas sp. RS175 | PFR28_00960 | | hypothetical protein | strong | 28 | 61 |
| Dickeya dadantii 3937 | DDA3937_RS12750 | | L,D-transpeptidase family protein | insig. | 31 | 59 |
| Serratia liquefaciens MT49 | IAI46_02600 | | L,D-transpeptidase family protein | insig. | 28 | 61 |
| Escherichia fergusonii Becca | EFB2_02314 | | putative L,D-transpeptidase YnhG | insig. | 32 | 58 |
| Escherichia coli ECRC101 | OKFHMN_27280 | ldtE | L,D-transpeptidase LdtE | insig. | 32 | 58 |
| Escherichia coli ECRC101 | MCAODC_18130 | ldtE | L,D-transpeptidase LdtE | insig. | 32 | 58 |
| Escherichia coli ECRC102 | NIAGMN_00785 | ldtE | L,D-transpeptidase LdtE | insig. | 32 | 58 |
| Escherichia coli ECRC62 | BNILDI_16590 | ldtE | L,D-transpeptidase LdtE | insig. | 32 | 58 |
| Escherichia coli ECRC98 | JDDGAC_01855 | ldtE | L,D-transpeptidase LdtE | no data | 32 | 58 |
| Escherichia coli ECRC99 | KEDOAH_00830 | ldtE | L,D-transpeptidase LdtE | no data | 32 | 58 |
| Escherichia coli Nissle 1917 | ECOLIN_RS09385 | | L,D-transpeptidase LdtE | no data | 32 | 58 |
| Escherichia coli BL21 | ECD_01647 | | murein L,D-transpeptidase | no data | 32 | 58 |
| Escherichia coli ECOR27 | NOLOHH_17800 | ldtE | L,D-transpeptidase LdtE | no data | 32 | 58 |
| Escherichia coli ECOR38 | HEPCGN_05665 | ldtE | L,D-transpeptidase LdtE | cofit | 32 | 58 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02046 | | putative L,D-transpeptidase YnhG | insig. | 32 | 58 |
| Escherichia coli BW25113 | b1678 | ynhG | hypothetical protein (NCBI) | insig. | 32 | 58 |
| Azospirillum sp. SherDot2 | MPMX19_04296 | | hypothetical protein | insig. | 29 | 59 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3970 | | L,D-transpeptidase YbiS | insig. | 32 | 63 |
| Pectobacterium carotovorum WPP14 | HER17_RS17580 | | L,D-transpeptidase family protein | cofit | 31 | 61 |
| Escherichia fergusonii Becca | EFB2_01899 | | putative L,D-transpeptidase ErfK/SrfK | insig. | 29 | 59 |
| Escherichia coli ECOR38 | HEPCGN_03475 | ldtA | L,D-transpeptidase | cofit | 29 | 59 |
| Escherichia coli Nissle 1917 | ECOLIN_RS11615 | | L,D-transpeptidase | insig. | 29 | 59 |
| Enterobacter sp. TBS_079 | MPMX20_02985 | | putative L,D-transpeptidase ErfK/SrfK | insig. | 29 | 58 |