| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Rhodopseudomonas palustris CGA009 | 1.0 | TX73_012035 | | ABC transporter substrate-binding protein | 1.0 | TX73_012020 | | NAD-dependent succinate-semialdehyde dehydrogenase | 0.70 | 5 |
| Bosea sp. OAE506 | 0.47 | ABIE41_RS02550 | | ABC transporter substrate-binding protein | 0.72 | ABIE41_RS20985 | | NAD-dependent succinate-semialdehyde dehydrogenase | low | > 77 |
| Agrobacterium fabrum C58 | 0.35 | Atu3433 | | oligopeptide ABC transporter substrate-binding protein | 0.62 | Atu4247 | | aldehyde dehydrogenase | low | > 89 |
| Pectobacterium carotovorum WPP14 | 0.34 | HER17_RS16445 | | ABC transporter substrate-binding protein | 0.61 | HER17_RS09885 | | NAD-dependent succinate-semialdehyde dehydrogenase | low | > 75 |
| Dickeya dianthicola ME23 | 0.33 | DZA65_RS12365 | | ABC transporter substrate-binding protein | 0.59 | DZA65_RS12400 | | NAD-dependent succinate-semialdehyde dehydrogenase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.33 | HGI48_RS11825 | | ABC transporter substrate-binding protein | 0.59 | HGI48_RS11855 | | NAD-dependent succinate-semialdehyde dehydrogenase | low | > 71 |
| Sinorhizobium meliloti 1021 | 0.31 | SMa2075 | | ABC transporter substrate-binding protein | 0.64 | SMc02780 | | succinate-semialdehyde dehydrogenase [NADP+] protein | low | > 103 |
| Rahnella sp. WP5 | 0.17 | EX31_RS02025 | | ABC transporter substrate-binding protein | 0.55 | EX31_RS12300 | | NAD-dependent succinate-semialdehyde dehydrogenase | low | > 89 |
| Dickeya dadantii 3937 | 0.16 | DDA3937_RS06935 | | ABC transporter substrate-binding protein | 0.33 | DDA3937_RS07560 | | aminobutyraldehyde dehydrogenase | low | > 74 |
| Escherichia coli ECRC102 | 0.16 | NIAGMN_25450 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.64 | NIAGMN_18680 | gabD | NADP-dependent succinate-semialdehyde dehydrogenase | — | — |
| Escherichia coli ECRC98 | 0.16 | JDDGAC_03810 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.64 | JDDGAC_24575 | gabD | NADP-dependent succinate-semialdehyde dehydrogenase | low | > 86 |
| Escherichia coli ECRC99 | 0.16 | KEDOAH_27125 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.64 | KEDOAH_07225 | gabD | NADP-dependent succinate-semialdehyde dehydrogenase | — | — |
| Escherichia coli ECOR38 | 0.16 | HEPCGN_26475 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.64 | HEPCGN_20150 | gabD | NADP-dependent succinate-semialdehyde dehydrogenase | low | > 87 |
| Escherichia coli ECRC62 | 0.16 | BNILDI_17445 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.64 | BNILDI_11300 | gabD | NADP-dependent succinate-semialdehyde dehydrogenase | low | > 75 |
| Escherichia coli ECRC100 | 0.16 | OKFHMN_01320 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.64 | OKFHMN_20915 | gabD | NADP-dependent succinate-semialdehyde dehydrogenase | 0.55 | 65 |
| Escherichia coli ECRC101 | 0.16 | MCAODC_16620 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.64 | MCAODC_11435 | gabD | NADP-dependent succinate-semialdehyde dehydrogenase | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.16 | OHPLBJKB_02230 | | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.63 | OHPLBJKB_01071 | | Succinate-semialdehyde dehydrogenase [NADP(+)] GabD | low | > 73 |
| Escherichia coli BW25113 | 0.16 | b1487 | ddpA | D-ala-D-a la transporter subunit (NCBI) | 0.64 | b2661 | gabD | succinate-semialdehyde dehydrogenase I, NADP-dependent (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.16 | ECD_01445 | | D,D-dipeptide ABC transporter periplasmic binding protein | 0.63 | ECD_02517 | | succinate-semialdehyde dehydrogenase I, NADP-dependent | low | > 61 |
| Escherichia coli ECOR27 | 0.15 | NOLOHH_18960 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.64 | NOLOHH_12740 | gabD | NADP-dependent succinate-semialdehyde dehydrogenase | low | > 75 |
| Enterobacter sp. TBS_079 | 0.15 | MPMX20_02356 | | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.53 | MPMX20_04145 | | Glutarate-semialdehyde dehydrogenase | low | > 85 |
| Variovorax sp. OAS795 | 0.15 | ABID97_RS11660 | | ABC transporter substrate-binding protein | 0.59 | ABID97_RS11235 | | NAD-dependent succinate-semialdehyde dehydrogenase | low | > 91 |
| Serratia liquefaciens MT49 | 0.15 | IAI46_12025 | | ABC transporter substrate-binding protein | 0.62 | IAI46_22160 | | NAD-dependent succinate-semialdehyde dehydrogenase | low | > 86 |
| Shewanella loihica PV-4 | 0.13 | Shew_2498 | | extracellular solute-binding protein (RefSeq) | 0.54 | Shew_3173 | | succinic semialdehyde dehydrogenase (RefSeq) | low | > 60 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.13 | ABZR88_RS16670 | | ABC transporter substrate-binding protein | 0.28 | ABZR88_RS05210 | | NAD-dependent succinate-semialdehyde dehydrogenase | low | > 71 |
| Kangiella aquimarina DSM 16071 | 0.13 | B158DRAFT_1047 | | ABC-type dipeptide transport system, periplasmic component | 0.51 | B158DRAFT_1604 | | succinate-semialdehyde dehydrogenase | low | > 40 |
| Vibrio cholerae E7946 ATCC 55056 | 0.11 | CSW01_08445 | | ABC transporter substrate-binding protein | 0.56 | CSW01_08760 | | NAD-dependent succinate-semialdehyde dehydrogenase | low | > 62 |
| Shewanella oneidensis MR-1 | 0.11 | SO1805 | sapA | peptide ABC transporter, periplasmic peptide-binding protein (NCBI ptt file) | 0.62 | SO1275 | gabD | succinate-semialdehyde dehydrogenase (NADP+) [EC: 1.2.1.16] (from data) | low | > 76 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.07 | CA264_04300 | | ABC transporter substrate-binding protein | 0.30 | CA264_02675 | | succinate-semialdehyde dehydrogenase | low | > 74 |
Not shown: 21 genomes with orthologs for TX73_012035 only; 20 genomes with orthologs for TX73_012020 only