Conservation of cofitness between Psyr_3995 and Psyr_2533 in Pseudomonas syringae pv. syringae B728a
12 genomes with putative orthologs of both genes
| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_3995 | | Helix-turn-helix, Fis-type | 1.0 | Psyr_2533 | | FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal | 0.38 | 5 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_3995 | | Helix-turn-helix, Fis-type | 1.00 | Psyr_2533 | | FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal | low | > 86 |
| Pseudomonas sp. SVBP6 | 0.81 | COO64_RS26185 | | sigma-54 dependent transcriptional regulator | 0.68 | COO64_RS15335 | | FAD-binding and (Fe-S)-binding domain-containing protein | low | > 93 |
| Pseudomonas fluorescens FW300-N1B4 | 0.80 | Pf1N1B4_685 | | Nitrogen regulation protein NR(I) | 0.64 | Pf1N1B4_4229 | | Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.80 | AO356_17800 | | C4-dicarboxylate ABC transporter | 0.79 | AO356_29050 | | hypothetical protein | low | > 104 |
| Pseudomonas sp. RS175 | 0.80 | PFR28_03462 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | 0.78 | PFR28_01530 | | hypothetical protein | low | > 88 |
| Pseudomonas sp. DMC3 | 0.80 | GFF5041 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | 0.70 | GFF1760 | | putative protein | low | > 89 |
| Pseudomonas putida KT2440 | 0.79 | PP_1401 | | C4-dicarboxylate transport transcriptional regulatory protein | 0.69 | PP_4493 | | D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) (from data) | low | > 96 |
| Pseudomonas sp. BP01 | 0.79 | JOY50_RS14530 | | sigma-54 dependent transcriptional regulator | 0.69 | JOY50_RS01040 | | FAD-binding and (Fe-S)-binding domain-containing protein | low | > 84 |
| Pseudomonas segetis P6 | 0.65 | ACVTMO_RS01055 | | sigma-54-dependent transcriptional regulator | 0.06 | ACVTMO_RS05805 | | FAD-binding and (Fe-S)-binding domain-containing protein | low | > 75 |
| Shewanella loihica PV-4 | 0.50 | Shew_1442 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | 0.43 | Shew_1550 | | FAD linked oxidase domain-containing protein (RefSeq) | low | > 60 |
| Rhodospirillum rubrum S1H | 0.48 | Rru_A1435 | | Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) | 0.31 | Rru_A2060 | | FAD linked oxidase (NCBI) | low | > 58 |
| Dinoroseobacter shibae DFL-12 | 0.46 | Dshi_1196 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | 0.15 | Dshi_3324 | | FAD linked oxidase domain protein (RefSeq) | low | > 64 |
Not shown: 20 genomes with orthologs for Psyr_3995 only; 44 genomes with orthologs for Psyr_2533 only