Conservation of cofitness between Psyr_1547 and Psyr_0896 in Pseudomonas syringae pv. syringae B728a

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_1547 glycine cleavage system transcriptional repressor 1.0 Psyr_0896 Aldose 1-epimerase 0.34 20
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_1547 glycine cleavage system transcriptional repressor 1.00 Psyr_0896 Aldose 1-epimerase low > 86
Pseudomonas simiae WCS417 0.92 PS417_07160 glycine cleavage system protein R 0.61 PS417_17385 aldose epimerase low > 88
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_04535 glycine cleavage system protein R 0.60 AO356_23040 aldose epimerase low > 104
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_3331 Glycine cleavage system transcriptional antiactivator GcvR 0.54 Pf1N1B4_4509 Aldose 1-epimerase low > 87
Pseudomonas sp. RS175 0.91 PFR28_00698 Glycine cleavage system transcriptional repressor 0.60 PFR28_02441 putative protein YphB low > 88
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_2748 Glycine cleavage system transcriptional antiactivator GcvR 0.60 Pf6N2E2_484 Aldose 1-epimerase low > 103
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS07270 glycine cleavage system protein R 0.61 PFLU_RS19310 aldose 1-epimerase low > 109
Pseudomonas fluorescens SBW25 0.91 PFLU_RS07270 glycine cleavage system protein R 0.61 PFLU_RS19310 aldose 1-epimerase low > 109
Pseudomonas fluorescens GW456-L13 0.91 PfGW456L13_4508 Glycine cleavage system transcriptional antiactivator GcvR 0.64 PfGW456L13_3510 Aldose 1-epimerase low > 87
Pseudomonas stutzeri RCH2 0.86 Psest_1514 Glycine cleavage system regulatory protein 0.27 Psest_0379 Galactose mutarotase and related enzymes low > 67
Pseudomonas putida KT2440 0.81 PP_1236 putative Glycine cleavage system transcriptional repressor 0.57 PP_1165 conserved protein of unknown function low > 96
Escherichia coli Nissle 1917 0.14 ECOLIN_RS14150 glycine cleavage system transcriptional repressor 0.24 ECOLIN_RS14405 aldose 1-epimerase low > 55
Escherichia coli ECRC62 0.14 BNILDI_12380 gcvR glycine cleavage system transcriptional repressor 0.25 BNILDI_12020 yphB Uncharacterized protein YphB low > 75
Escherichia coli BW25113 0.14 b2479 gcvR transcriptional regulation of gcv operon (VIMSS) 0.25 b2544 yphB hypothetical protein (NCBI) low > 76
Escherichia coli ECRC101 0.14 MCAODC_12440 gcvR glycine cleavage system transcriptional repressor 0.24 MCAODC_12080 yphB Uncharacterized protein YphB low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.14 OHPLBJKB_01250 Glycine cleavage system transcriptional repressor 0.25 OHPLBJKB_01165 putative protein YphB low > 73
Escherichia coli ECRC102 0.14 NIAGMN_19680 gcvR glycine cleavage system transcriptional repressor 0.24 NIAGMN_19320 yphB Uncharacterized protein YphB — —
Escherichia coli ECRC100 0.14 OKFHMN_21910 gcvR glycine cleavage system transcriptional repressor 0.24 OKFHMN_21550 yphB Uncharacterized protein YphB low > 80
Escherichia coli ECOR27 0.14 NOLOHH_13570 gcvR glycine cleavage system transcriptional repressor 0.25 NOLOHH_13220 yphB Uncharacterized protein YphB low > 75
Escherichia fergusonii Becca 0.14 EFB2_01407 Glycine cleavage system transcriptional repressor 0.24 EFB2_01352 putative protein YphB low > 86
Escherichia coli BL21 0.14 ECD_02371 transcriptional repressor, regulatory protein accessory to GcvA 0.25 ECD_02436 mutarotase superfamily protein, YphB family low > 61
Escherichia coli ECOR38 0.14 HEPCGN_21080 gcvR glycine cleavage system transcriptional repressor 0.24 HEPCGN_20690 yphB Uncharacterized protein YphB low > 87
Escherichia coli ECRC98 0.14 JDDGAC_25855 gcvR glycine cleavage system transcriptional repressor 0.24 JDDGAC_25225 yphB Uncharacterized protein YphB low > 86
Escherichia coli ECRC99 0.14 KEDOAH_06310 gcvR glycine cleavage system transcriptional repressor 0.24 KEDOAH_06670 yphB Uncharacterized protein YphB — —

Not shown: 17 genomes with orthologs for Psyr_1547 only; 20 genomes with orthologs for Psyr_0896 only