Conservation of cofitness between Psyr_1622 and Psyr_0475 in Pseudomonas syringae pv. syringae B728a

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_1622 regulatory protein, LuxR:Autoinducer-binding protein 1.0 Psyr_0475 Protein of unknown function YGGT 0.42 11
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_1622 regulatory protein, LuxR:Autoinducer-binding protein 1.00 Psyr_0475 Protein of unknown function YGGT low > 86
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_08640 hypothetical protein 0.69 AO353_08170 hypothetical protein low > 101
Pectobacterium carotovorum WPP14 0.26 HER17_RS13915 LuxR family transcriptional regulator 0.32 HER17_RS03800 YggT family protein low > 75
Dickeya dianthicola ME23 0.24 DZA65_RS00515 LuxR family transcriptional regulator 0.29 DZA65_RS18445 YggT family protein low > 75
Dickeya dianthicola 67-19 0.24 HGI48_RS00515 LuxR family transcriptional regulator 0.29 HGI48_RS17355 YggT family protein low > 71
Dickeya dadantii 3937 0.23 DDA3937_RS20730 LuxR family transcriptional regulator 0.29 DDA3937_RS17310 YggT family protein low > 74
Serratia liquefaciens MT49 0.23 IAI46_00340 LuxR family transcriptional regulator 0.29 IAI46_21420 YggT family protein low > 87
Pseudomonas sp. RS175 0.22 PFR28_02249 hypothetical protein 0.85 PFR28_04244 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_28160 hypothetical protein 0.85 AO356_13415 hypothetical protein low > 104
Enterobacter asburiae PDN3 0.20 EX28DRAFT_1180 DNA-binding HTH domain-containing proteins 0.28 EX28DRAFT_2990 Predicted integral membrane protein low > 76
Pseudomonas fluorescens SBW25-INTG 0.20 PFLU_RS06840 LuxR family transcriptional regulator 0.84 PFLU_RS28380 YggT family protein low > 109
Pseudomonas fluorescens SBW25 0.20 PFLU_RS06840 LuxR family transcriptional regulator 0.84 PFLU_RS28380 YggT family protein low > 109
Pseudomonas orientalis W4I3 0.20 QF045_RS26625 LuxR family transcriptional regulator 0.62 QF045_RS01135 YggT family protein low > 93
Pseudomonas aeruginosa PA14 0.18 IKLFDK_09265 quorum-sensing transcriptional repressor QscR 0.74 IKLFDK_23460 Uncharacterized protein PA0392 — —
Pseudomonas aeruginosa MRSN321 0.18 DY961_RS21240 qscR;inference=COORDINATES quorum-sensing transcriptional repressor QscR 0.74 DY961_RS21940 YggT family protein low > 100
Pseudomonas aeruginosa PUPa3 0.18 DQ20_RS0130700 qscR;inference=COORDINATES quorum-sensing transcriptional repressor QscR 0.74 DQ20_RS37360 YggT family protein low > 101
Pseudomonas simiae WCS417 0.18 PS417_24330 LuxR family transcriptional regulator 0.84 PS417_26735 membrane protein — —
Pseudomonas lactucae CFBP13502 0.17 GEMAOFIL_05019 Transcriptional activator protein AnoR 0.61 GEMAOFIL_05484 hypothetical protein low > 96
Escherichia coli Nissle 1917 0.15 ECOLIN_RS10915 transcriptional regulator SdiA 0.27 ECOLIN_RS16420 osmotic shock tolerance protein YggT — —
Escherichia coli ECOR38 0.15 HEPCGN_04165 sdiA transcriptional regulator SdiA 0.27 HEPCGN_18555 yggT osmotic shock tolerance protein YggT low > 88
Escherichia fergusonii Becca 0.15 EFB2_02030 Regulatory protein SdiA 0.27 EFB2_00950 hypothetical protein low > 86
Escherichia coli BW25113 0.14 b1916 sdiA DNA-binding transcriptional activator (NCBI) 0.27 b2952 yggT predicted inner membrane protein (NCBI) low > 76
Escherichia coli ECRC100 0.14 OKFHMN_25810 sdiA transcriptional regulator SdiA 0.27 OKFHMN_19250 yggT osmotic shock tolerance protein YggT low > 79
Escherichia coli ECRC62 0.14 BNILDI_15220 sdiA transcriptional regulator SdiA 0.27 BNILDI_09700 yggT osmotic shock tolerance protein YggT low > 75
Escherichia coli ECOR27 0.14 NOLOHH_16430 sdiA transcriptional regulator SdiA 0.27 NOLOHH_11120 yggT osmotic shock tolerance protein YggT low > 76
Escherichia coli ECRC101 0.14 MCAODC_19580 sdiA transcriptional regulator SdiA 0.27 MCAODC_09770 yggT osmotic shock tolerance protein YggT low > 87
Escherichia coli ECRC99 0.14 KEDOAH_02280 sdiA transcriptional regulator SdiA 0.27 KEDOAH_08890 yggT osmotic shock tolerance protein YggT — —
Escherichia coli ECRC98 0.14 JDDGAC_00400 sdiA transcriptional regulator SdiA 0.27 JDDGAC_22880 yggT osmotic shock tolerance protein YggT low > 87
Escherichia coli ECRC102 0.14 NIAGMN_02240 sdiA transcriptional regulator SdiA 0.27 NIAGMN_17015 yggT osmotic shock tolerance protein YggT low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.14 OHPLBJKB_01813 Regulatory protein SdiA 0.27 OHPLBJKB_00764 hypothetical protein low > 74
Klebsiella michiganensis M5al 0.14 BWI76_RS18345 transcriptional regulator SdiA 0.29 BWI76_RS24105 resistance protein low > 92

Not shown: 4 genomes with orthologs for Psyr_1622 only; 49 genomes with orthologs for Psyr_0475 only