Conservation of cofitness between Pf6N2E2_4435 and Pf6N2E2_5229 in Pseudomonas fluorescens FW300-N2E2
13 genomes with putative orthologs of both genes
Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pseudomonas fluorescens FW300-N2E2 | 1.0 | Pf6N2E2_4435 | | Regulator of sigma D | 1.0 | Pf6N2E2_5229 | | Transcriptional regulator, MerR family, associated with photolyase | 0.31 | 17 |
Pseudomonas sp. RS175 | 0.99 | PFR28_04361 | | Regulator of sigma D | 0.79 | PFR28_03647 | | hypothetical protein | low | > 88 |
Pseudomonas fluorescens FW300-N2C3 | 0.97 | AO356_12810 | | transcriptional regulator | 0.89 | AO356_16535 | | MerR family transcriptional regulator | low | > 104 |
Pseudomonas fluorescens FW300-N1B4 | 0.93 | Pf1N1B4_2190 | | Regulator of sigma D | 0.73 | Pf1N1B4_2928 | | Transcriptional regulator, MerR family, associated with photolyase | low | > 87 |
Pseudomonas fluorescens GW456-L13 | 0.93 | PfGW456L13_861 | | Regulator of sigma D | 0.70 | PfGW456L13_1590 | | Transcriptional regulator, MerR family, associated with photolyase | low | > 87 |
Pseudomonas fluorescens FW300-N2E3 | 0.92 | AO353_08965 | | transcriptional regulator | 0.64 | AO353_14825 | | MerR family transcriptional regulator | low | > 101 |
Pseudomonas simiae WCS417 | 0.86 | PS417_27505 | | transcriptional regulator | 0.60 | PS417_03670 | | MerR family transcriptional regulator | 0.27 | 63 |
Pseudomonas fluorescens SBW25-INTG | 0.85 | PFLU_RS29185 | | Rsd/AlgQ family anti-sigma factor | 0.63 | PFLU_RS03720 | | MerR family transcriptional regulator | low | > 109 |
Pseudomonas fluorescens SBW25 | 0.85 | PFLU_RS29185 | | Rsd/AlgQ family anti-sigma factor | 0.63 | PFLU_RS03720 | | MerR family transcriptional regulator | low | > 109 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.75 | Psyr_0056 | | Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ | 0.59 | Psyr_0962 | | transcriptional regulator, MerR family | low | > 86 |
Pseudomonas syringae pv. syringae B728a | 0.75 | Psyr_0056 | | Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ | 0.59 | Psyr_0962 | | transcriptional regulator, MerR family | low | > 86 |
Pseudomonas sp. S08-1 | 0.70 | OH686_13925 | | Alginate regulatory protein AlgQ, positive transcriptional regulator of AlgD | 0.43 | OH686_07845 | | Transcriptional regulator, MerR family, associated with photolyase | low | > 80 |
Pseudomonas stutzeri RCH2 | 0.65 | Psest_3743 | | Regulator of sigma D | 0.48 | Psest_2396 | | Predicted transcriptional regulators | low | > 67 |
Pseudomonas putida KT2440 | 0.64 | PP_0191 | | Transcriptional regulatory protein AlgQ | 0.36 | PP_0740 | | Transcriptional regulator, MerR family | low | > 96 |
Not shown: 32 genomes with orthologs for Pf6N2E2_4435 only; 0 genomes with orthologs for Pf6N2E2_5229 only