Conservation of cofitness between Pf6N2E2_614 and Pf6N2E2_2895 in Pseudomonas fluorescens FW300-N2E2
13 genomes with putative orthologs of both genes
Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pseudomonas fluorescens FW300-N2E2 | 1.0 | Pf6N2E2_614 | | 3-carboxymuconate cyclase | 1.0 | Pf6N2E2_2895 | | Integral membrane sensor signal transduction histidine kinase (EC 2.7.13.3), glucose catabolism cluster | 0.41 | 6 |
Pseudomonas fluorescens FW300-N2C3 | 0.97 | AO356_24610 | | 3-carboxymuconate cyclase | 0.99 | AO356_05205 | | histidine kinase | 0.21 | 104 |
Pseudomonas sp. RS175 | 0.93 | PFR28_01584 | | 6-phosphogluconolactonase | 0.93 | PFR28_00564 | | Adaptive-response sensory-kinase SasA | low | > 88 |
Pseudomonas fluorescens GW456-L13 | 0.81 | PfGW456L13_3314 | | D-galactono-lactonase (EC 3.1.1.-) (from data) | 0.90 | PfGW456L13_1892 | | Integral membrane sensor signal transduction histidine kinase (EC 2.7.13.3), glucose catabolism cluster | 0.30 | 70 |
Pseudomonas fluorescens FW300-N2E3 | 0.80 | AO353_23650 | | 3-carboxymuconate cyclase | 0.87 | AO353_03405 | | histidine kinase | low | > 101 |
Pseudomonas fluorescens FW300-N1B4 | 0.79 | Pf1N1B4_4626 | | 3-carboxymuconate cyclase | 0.89 | Pf1N1B4_598 | | Integral membrane sensor signal transduction histidine kinase (EC 2.7.13.3), glucose catabolism cluster | — | — |
Pseudomonas fluorescens SBW25-INTG | 0.78 | PFLU_RS17155 | | lactonase family protein | 0.85 | PFLU_RS24315 | | HAMP domain-containing protein | low | > 109 |
Pseudomonas fluorescens SBW25 | 0.78 | PFLU_RS17155 | | lactonase family protein | 0.85 | PFLU_RS24315 | | HAMP domain-containing protein | low | > 109 |
Pseudomonas simiae WCS417 | 0.78 | PS417_15140 | | 3-carboxymuconate cyclase | 0.85 | PS417_22675 | | histidine kinase | low | > 88 |
Pseudomonas syringae pv. syringae B728a | 0.58 | Psyr_1712 | | conserved hypothetical protein | 0.79 | Psyr_1112 | | ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal | low | > 86 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.58 | Psyr_1712 | | conserved hypothetical protein | 0.79 | Psyr_1112 | | ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal | low | > 86 |
Pseudomonas putida KT2440 | 0.53 | PP_2021 | | L-alpha-hydroxyglutaric acid gamma-lactonase | 0.73 | PP_1013 | | Sensor histidine kinase | 0.20 | 42 |
Pseudomonas stutzeri RCH2 | 0.52 | Psest_4141 | | 3-carboxymuconate cyclase | 0.73 | Psest_1895 | | Signal transduction histidine kinase | low | > 67 |
Pseudomonas sp. S08-1 | 0.39 | OH686_01265 | | hypothetical protein | 0.77 | OH686_02475 | | Integral membrane sensor signal transduction histidine kinase , glucose catabolism cluster | low | > 80 |
Not shown: 27 genomes with orthologs for Pf6N2E2_614 only; 2 genomes with orthologs for Pf6N2E2_2895 only