Conservation of cofitness between PP_4493 and PP_5260 in Pseudomonas putida KT2440

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4493 D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) (from data) 1.0 PP_5260 2-oxoadipate decarboxylase/hydroxylase (2-hydroxyglutarate synthase) (from data) 0.76 5
Pseudomonas fluorescens FW300-N1B4 0.81 Pf1N1B4_4229 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD 0.65 Pf1N1B4_5865 FIG00960493: hypothetical protein low > 87
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_2533 FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal 0.68 Psyr_3516 Protein of unknown function DUF1338 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_2533 FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal 0.68 Psyr_3516 Protein of unknown function DUF1338 low > 86
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_29050 hypothetical protein 0.66 AO356_01105 putative hydrolase, required for lysine catabolism (from data) 0.33 21
Pseudomonas sp. RS175 0.67 PFR28_01530 hypothetical protein 0.66 PFR28_02761 hypothetical protein low > 88
Rhizobium sp. OAE497 0.49 ABIE40_RS21040 FAD-binding and (Fe-S)-binding domain-containing protein 0.54 ABIE40_RS21025 VOC family protein 0.63 4
Klebsiella michiganensis M5al 0.49 BWI76_RS17050 FAD-binding oxidoreductase 0.53 BWI76_RS13295 DUF1338 domain-containing protein low > 92
Pantoea sp. MT58 0.49 IAI47_10890 FAD-binding oxidoreductase 0.52 IAI47_09600 VOC family protein low > 76
Serratia liquefaciens MT49 0.49 IAI46_11130 FAD-binding oxidoreductase 0.66 IAI46_08675 VOC family protein low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_02037 hypothetical protein 0.53 OHPLBJKB_02292 hypothetical protein low > 73
Escherichia coli BL21 0.48 ECD_01656 putative FAD-linked oxidoreductase 0.53 ECD_01380 putative metalloenzyme — —
Escherichia coli ECRC101 0.48 OKFHMN_27230 ydiJ Uncharacterized protein YdiJ 0.53 OKFHMN_01650 ydcJ Uncharacterized protein YdcJ — —
Escherichia coli ECRC62 0.48 BNILDI_16540 ydiJ Uncharacterized protein YdiJ 0.53 BNILDI_17785 ydcJ Uncharacterized protein YdcJ — —
Escherichia coli ECRC99 0.48 KEDOAH_00880 ydiJ Uncharacterized protein YdiJ 0.53 KEDOAH_26790 ydcJ Uncharacterized protein YdcJ — —
Escherichia coli ECRC98 0.48 JDDGAC_01805 ydiJ Uncharacterized protein YdiJ 0.52 JDDGAC_04140 ydcJ Uncharacterized protein YdcJ — —
Escherichia coli ECRC102 0.48 NIAGMN_00835 ydiJ Uncharacterized protein YdiJ 0.53 NIAGMN_25785 ydcJ Uncharacterized protein YdcJ — —
Escherichia coli ECRC101 0.48 MCAODC_18180 ydiJ Uncharacterized protein YdiJ 0.53 MCAODC_16285 ydcJ Uncharacterized protein YdcJ — —
Escherichia coli ECOR38 0.48 HEPCGN_05615 ydiJ Uncharacterized protein YdiJ 0.53 HEPCGN_26165 ydcJ Uncharacterized protein YdcJ low > 85
Escherichia coli BW25113 0.48 b1687 ydiJ predicted FAD-linked oxidoreductase (NCBI) 0.53 b1423 ydcJ hypothetical protein (NCBI) low > 76
Escherichia coli Nissle 1917 0.48 ECOLIN_RS09430 FAD-binding and (Fe-S)-binding domain-containing protein 0.52 ECOLIN_RS08225 VOC family protein — —
Escherichia fergusonii Becca 0.48 EFB2_02305 hypothetical protein 0.52 EFB2_02557 hypothetical protein low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF3554 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD 0.52 GFF2614 FIG074102: hypothetical protein low > 78
Escherichia coli ECOR27 0.48 NOLOHH_17750 ydiJ Uncharacterized protein YdiJ 0.53 NOLOHH_19330 ydcJ Uncharacterized protein YdcJ — —
Enterobacter sp. TBS_079 0.48 MPMX20_01926 hypothetical protein 0.51 MPMX20_02227 hypothetical protein 0.46 21
Enterobacter asburiae PDN3 0.47 EX28DRAFT_1696 FAD/FMN-containing dehydrogenases 0.50 EX28DRAFT_1238 Uncharacterized protein conserved in bacteria low > 76
Variovorax sp. SCN45 0.16 GFF1371 Fe-S protein, homolog of lactate dehydrogenase SO1521 0.55 GFF740 Uncharacterized protein YdcJ low > 127

Not shown: 20 genomes with orthologs for PP_4493 only; 12 genomes with orthologs for PP_5260 only