Conservation of cofitness between PFLU_RS17845 and PFLU_RS06430 in Pseudomonas fluorescens SBW25

27 genomes with putative orthologs of both genes

Organism	Ratio1	Gene1	Name1	Description1	Ratio2	Gene2	Name2	Description2	Cofit	Rank
Pseudomonas fluorescens SBW25	1.0	PFLU_RS17845		YjbH domain-containing protein	1.0	PFLU_RS06430		RNA polymerase sigma factor RpoS	0.49	18
Pseudomonas fluorescens SBW25-INTG	1.00	PFLU_RS17845		YjbH domain-containing protein	1.00	PFLU_RS06430		RNA polymerase sigma factor RpoS	low	> 109
Pseudomonas fluorescens FW300-N1B4	0.77	Pf1N1B4_5932		YjbH outer membrane lipoprotein	0.96	Pf1N1B4_3115		RNA polymerase sigma factor RpoS	—	—
Pseudomonas fluorescens GW456-L13	0.74	PfGW456L13_4004		YjbH outer membrane lipoprotein	0.95	PfGW456L13_4674		RNA polymerase sigma factor RpoS	low	> 87
Dickeya dadantii 3937	0.39	DDA3937_RS06825		YjbH domain-containing protein	0.62	DDA3937_RS16875		RNA polymerase sigma factor RpoS	—	—
Dickeya dianthicola 67-19	0.38	HGI48_RS06860		YjbH domain-containing protein	0.62	HGI48_RS16945		RNA polymerase sigma factor RpoS	low	> 71
Dickeya dianthicola ME23	0.38	DZA65_RS07200		YjbH domain-containing protein	0.62	DZA65_RS18020		RNA polymerase sigma factor RpoS	low	> 75
Pectobacterium carotovorum WPP14	0.37	HER17_RS14485		YjbH domain-containing protein	0.62	HER17_RS04350		RNA polymerase sigma factor RpoS	low	> 75
Pantoea sp. MT58	0.35	IAI47_17985		YjbH domain-containing protein	0.63	IAI47_04235		RNA polymerase sigma factor RpoS	low	> 76
Escherichia coli ECOR27	0.34	NOLOHH_21650	gfcD	Uncharacterized lipoprotein GfcD	0.63	NOLOHH_12310	rpoS	RNA polymerase sigma factor RpoS	low	> 75
Escherichia coli BL21	0.34	ECD_00987		putative O-antigen capsule production periplasmic protein	0.63	ECD_02591		RNA polymerase, sigma S (sigma 38) factor	low	> 61
Escherichia coli ECRC98	0.34	JDDGAC_08360	gfcD	Uncharacterized lipoprotein GfcD	0.63	JDDGAC_24160	rpoS	RNA polymerase sigma factor RpoS	low	> 86
Escherichia coli ECRC100	0.34	OKFHMN_04750	gfcD	Uncharacterized lipoprotein GfcD	0.63	OKFHMN_20495	rpoS	RNA polymerase sigma factor RpoS	low	> 80
Escherichia coli ECRC101	0.34	MCAODC_24135	gfcD	Uncharacterized lipoprotein GfcD	0.63	MCAODC_11020	rpoS	RNA polymerase sigma factor RpoS	low	> 87
Escherichia coli ECRC102	0.34	NIAGMN_23100	gfcD	Uncharacterized lipoprotein GfcD	0.63	NIAGMN_18265	rpoS	RNA polymerase sigma factor RpoS	—	—
Escherichia coli BW25113	0.34	b0984	ymcA	hypothetical protein (NCBI)	0.63	b2741	rpoS	RNA polymerase sigma factor (NCBI)	low	> 76
Escherichia coli ECRC62	0.34	BNILDI_19815	gfcD	Uncharacterized lipoprotein GfcD	0.63	BNILDI_10860	rpoS	RNA polymerase sigma factor RpoS	low	> 75
Escherichia coli ECOR38	0.33	HEPCGN_11660	yjbH	Uncharacterized lipoprotein YjbH	0.63	HEPCGN_19675	rpoS	RNA polymerase sigma factor RpoS	low	> 87
Rahnella sp. WP5	0.33	EX31_RS02945		YjbH domain-containing protein	0.63	EX31_RS07825		RNA polymerase sigma factor RpoS	low	> 89
Erwinia tracheiphila SCR3	0.33	LU632_RS22345		YjbH domain-containing protein	0.62	LU632_RS06480	rpoS	RNA polymerase sigma factor RpoS	low	> 74
Escherichia fergusonii Becca	0.33	EFB2_04573		hypothetical protein	0.63	EFB2_01169		RNA polymerase sigma factor RpoS	low	> 86
Escherichia coli HS(pFamp)R (ATCC 700891)	0.33	OHPLBJKB_04017		hypothetical protein	0.63	OHPLBJKB_00992		RNA polymerase sigma factor RpoS	low	> 73
Enterobacter sp. TBS_079	0.33	MPMX20_00245		hypothetical protein	0.63	MPMX20_03627		RNA polymerase sigma factor RpoS	low	> 85
Enterobacter asburiae PDN3	0.32	EX28DRAFT_4314		Bacterial putative lipoprotein (DUF940)	0.63	EX28DRAFT_2837		RNA polymerase, sigma 38 subunit, RpoS	low	> 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	0.32	GFF1400		YjbH outer membrane lipoprotein	0.63	GFF4788		RNA polymerase sigma factor RpoS	low	> 78
Shewanella sp. ANA-3	0.30	Shewana3_1393		protein of unknown function DUF940, membrane lipoprotein putative (RefSeq)	0.61	Shewana3_1124		RNA polymerase, sigma 38 subunit, RpoS (RefSeq)	low	> 73
Shewanella oneidensis MR-1	0.30	SO3159		conserved hypothetical protein (NCBI ptt file)	0.61	SO3432	rpoS	RNA polymerase sigma-38 factor (NCBI ptt file)	low	> 76
Alteromonas macleodii MIT1002	0.29	MIT1002_00053		hypothetical protein	0.61	MIT1002_00625		RNA polymerase sigma factor RpoS	low	> 70

Not shown: 7 genomes with orthologs for PFLU_RS17845 only; 20 genomes with orthologs for PFLU_RS06430 only