Conservation of cofitness between PFLU_RS17845 and PFLU_RS00715 in Pseudomonas fluorescens SBW25

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS17845 YjbH domain-containing protein 1.0 PFLU_RS00715 efflux RND transporter periplasmic adaptor subunit 0.54 6
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS17845 YjbH domain-containing protein 1.00 PFLU_RS00715 efflux RND transporter periplasmic adaptor subunit low > 109
Pseudomonas fluorescens GW456-L13 0.74 PfGW456L13_4004 YjbH outer membrane lipoprotein 0.89 PfGW456L13_505 HlyD family secretion protein low > 87
Dickeya dadantii 3937 0.39 DDA3937_RS06825 YjbH domain-containing protein 0.33 DDA3937_RS01475 p-hydroxybenzoic acid efflux pump subunit AaeA low > 74
Dickeya dianthicola 67-19 0.38 HGI48_RS06860 YjbH domain-containing protein 0.33 HGI48_RS01395 p-hydroxybenzoic acid efflux pump subunit AaeA low > 71
Dickeya dianthicola ME23 0.38 DZA65_RS07200 YjbH domain-containing protein 0.33 DZA65_RS01455 p-hydroxybenzoic acid efflux pump subunit AaeA low > 75
Pectobacterium carotovorum WPP14 0.37 HER17_RS14485 YjbH domain-containing protein 0.37 HER17_RS20110 p-hydroxybenzoic acid efflux pump subunit AaeA low > 75
Pantoea sp. MT58 0.35 IAI47_17985 YjbH domain-containing protein 0.36 IAI47_02480 p-hydroxybenzoic acid efflux pump subunit AaeA low > 76
Escherichia coli ECOR27 0.34 NOLOHH_21650 gfcD Uncharacterized lipoprotein GfcD 0.36 NOLOHH_17985 ydhJ Uncharacterized protein YdhJ — —
Escherichia coli ECRC100 0.34 OKFHMN_04750 gfcD Uncharacterized lipoprotein GfcD 0.38 OKFHMN_27465 ydhJ Uncharacterized protein YdhJ — —
Escherichia coli ECRC101 0.34 MCAODC_24135 gfcD Uncharacterized lipoprotein GfcD 0.38 MCAODC_17945 ydhJ Uncharacterized protein YdhJ low > 87
Escherichia coli BL21 0.34 ECD_00987 putative O-antigen capsule production periplasmic protein 0.39 ECD_01614 putative membrane fusion protein (MFP) of YdhJK efflux pump low > 61
Escherichia coli ECRC102 0.34 NIAGMN_23100 gfcD Uncharacterized lipoprotein GfcD 0.38 NIAGMN_00600 ydhJ Uncharacterized protein YdhJ — —
Escherichia coli ECRC99 0.34 KEDOAH_22995 gfcD Uncharacterized lipoprotein GfcD 0.38 KEDOAH_00640 ydhJ Uncharacterized protein YdhJ — —
Escherichia coli ECRC98 0.34 JDDGAC_08360 gfcD Uncharacterized lipoprotein GfcD 0.38 JDDGAC_02055 ydhJ Uncharacterized protein YdhJ low > 86
Escherichia coli BW25113 0.34 b0984 ymcA hypothetical protein (NCBI) 0.39 b1644 b1644 putative membrane protein (VIMSS) low > 76
Escherichia coli ECRC62 0.34 BNILDI_19815 gfcD Uncharacterized lipoprotein GfcD 0.36 BNILDI_16775 ydhJ Uncharacterized protein YdhJ low > 75
Escherichia coli ECOR38 0.33 HEPCGN_11660 yjbH Uncharacterized lipoprotein YjbH 0.39 HEPCGN_05850 ydhJ Uncharacterized protein YdhJ 0.56 83
Rahnella sp. WP5 0.33 EX31_RS02945 YjbH domain-containing protein 0.35 EX31_RS12280 p-hydroxybenzoic acid efflux pump subunit AaeA low > 89
Escherichia fergusonii Becca 0.33 EFB2_04573 hypothetical protein 0.38 EFB2_02348 p-hydroxybenzoic acid efflux pump subunit AaeA low > 86
Erwinia tracheiphila SCR3 0.33 LU632_RS22345 YjbH domain-containing protein 0.35 LU632_RS21405 aaeA p-hydroxybenzoic acid efflux pump subunit AaeA low > 74
Escherichia coli Nissle 1917 0.33 ECOLIN_RS23260 YjbH domain-containing protein 0.38 ECOLIN_RS09170 HlyD family secretion protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_04017 hypothetical protein 0.39 OHPLBJKB_02081 p-hydroxybenzoic acid efflux pump subunit AaeA low > 73
Enterobacter sp. TBS_079 0.33 MPMX20_00245 hypothetical protein 0.38 MPMX20_01993 p-hydroxybenzoic acid efflux pump subunit AaeA low > 85
Enterobacter asburiae PDN3 0.32 EX28DRAFT_4314 Bacterial putative lipoprotein (DUF940) 0.37 EX28DRAFT_3292 RND family efflux transporter, MFP subunit 0.58 27
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.32 GFF1400 YjbH outer membrane lipoprotein 0.37 GFF2143 Membrane fusion component of tripartite multidrug resistance system low > 78
Shewanella oneidensis MR-1 0.30 SO3159 conserved hypothetical protein (NCBI ptt file) 0.13 SO4051 HlyD family secretion protein (NCBI ptt file) low > 76
Azospirillum brasilense Sp245 0.17 AZOBR_RS10610 hypothetical protein 0.40 AZOBR_RS19730 putative multidrug resistance membrane protein (MFP family) low > 97
Azospirillum sp. SherDot2 0.14 MPMX19_01368 hypothetical protein 0.44 MPMX19_05303 p-hydroxybenzoic acid efflux pump subunit AaeA low > 112

Not shown: 6 genomes with orthologs for PFLU_RS17845 only; 20 genomes with orthologs for PFLU_RS00715 only