Conservation of cofitness between OKFHMN_02265 and OKFHMN_28260 in Escherichia coli ECRC100

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC100 1.0 OKFHMN_02265 pgrR DNA-binding transcriptional regulator PgrR 1.0 OKFHMN_28260 umuD Protein UmuD 0.75 11
Escherichia coli ECRC101 1.00 MCAODC_16005 pgrR DNA-binding transcriptional regulator PgrR 1.00 MCAODC_21910 umuD Protein UmuD low > 87
Escherichia coli ECRC98 1.00 JDDGAC_04810 pgrR DNA-binding transcriptional regulator PgrR 1.00 JDDGAC_06250 umuD Protein UmuD low > 86
Escherichia coli ECRC99 1.00 KEDOAH_26505 pgrR DNA-binding transcriptional regulator PgrR 1.00 KEDOAH_25275 umuD Protein UmuD — —
Escherichia coli ECRC102 1.00 NIAGMN_26435 pgrR DNA-binding transcriptional regulator PgrR 1.00 NIAGMN_27960 umuD Protein UmuD — —
Escherichia coli BW25113 1.00 b1328 ycjZ predicted DNA-binding transcriptional regulator (NCBI) 1.00 b1183 umuD DNA polymerase V, subunit D (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02353 HTH-type transcriptional regulator PgrR 1.00 OHPLBJKB_02506 Protein UmuD low > 73
Escherichia coli BL21 1.00 ECD_01306 murein peptide degradation regulator 1.00 ECD_01158 translesion error-prone DNA polymerase V subunit; RecA-activated auto-protease — —
Escherichia coli ECRC62 1.00 BNILDI_18115 pgrR DNA-binding transcriptional regulator PgrR 1.00 BNILDI_18920 umuD Protein UmuD low > 75
Escherichia coli ECOR27 1.00 NOLOHH_19965 pgrR DNA-binding transcriptional regulator PgrR 1.00 NOLOHH_20755 umuD Protein UmuD low > 75
Escherichia coli Nissle 1917 0.99 ECOLIN_RS07975 DNA-binding transcriptional regulator PgrR 0.99 ECOLIN_RS07155 translesion error-prone DNA polymerase V autoproteolytic subunit — —
Escherichia fergusonii Becca 0.99 EFB2_02598 HTH-type transcriptional regulator PgrR 0.99 EFB2_02749 Protein UmuD low > 86
Enterobacter asburiae PDN3 0.52 EX28DRAFT_1046 Transcriptional regulator 0.84 EX28DRAFT_1262 Peptidase S24-like low > 76
Escherichia coli ECOR38 0.51 HEPCGN_07680 lysR LysR family transcriptional regulator 1.00 HEPCGN_24720 umuD Protein UmuD 0.49 12
Pseudomonas sp. RS175 0.51 PFR28_02305 HTH-type transcriptional regulator PgrR 0.31 PFR28_01191 Protein UmuD low > 88
Serratia liquefaciens MT49 0.50 IAI46_12365 LysR family transcriptional regulator 0.63 IAI46_15985 translesion error-prone DNA polymerase V autoproteolytic subunit low > 86
Rahnella sp. WP5 0.50 EX31_RS20830 LysR family transcriptional regulator 0.62 EX31_RS00810 translesion error-prone DNA polymerase V autoproteolytic subunit low > 89
Klebsiella michiganensis M5al 0.49 BWI76_RS18485 LysR family transcriptional regulator 0.76 BWI76_RS12380 DNA polymerase V subunit UmuD low > 92
Enterobacter sp. TBS_079 0.49 MPMX20_02525 HTH-type transcriptional regulator PgrR 0.61 MPMX20_02044 Protein UmuD low > 85
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_3801 transcriptional regulator, LysR family 0.36 Psyr_2762 Peptidase S24, S26A and S26B low > 86
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_3801 transcriptional regulator, LysR family 0.36 Psyr_2762 Peptidase S24, S26A and S26B low > 86
Bosea sp. OAE506 0.46 ABIE41_RS16645 LysR family transcriptional regulator 0.31 ABIE41_RS06705 translesion error-prone DNA polymerase V autoproteolytic subunit low > 77
Pantoea sp. MT58 0.39 IAI47_21445 LysR family transcriptional regulator 0.68 IAI47_10590 translesion error-prone DNA polymerase V autoproteolytic subunit low > 76
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS21720 transcriptional regulator 0.34 HSERO_RS17375 SOS mutagenesis protein low > 78

Not shown: 28 genomes with orthologs for OKFHMN_02265 only; 6 genomes with orthologs for OKFHMN_28260 only