Conservation of cofitness between JDDGAC_28300 and JDDGAC_06745 in Escherichia coli ECRC98

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_28300 mdtC multidrug efflux RND transporter permease subunit MdtC 1.0 JDDGAC_06745 potB spermidine/putrescine ABC transporter permease PotB 0.67 2
Escherichia coli ECRC99 1.00 KEDOAH_03960 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 KEDOAH_24705 potB spermidine/putrescine ABC transporter permease PotB — —
Escherichia coli ECRC101 1.00 MCAODC_20750 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 MCAODC_22465 potB spermidine/putrescine ABC transporter permease PotB low > 87
Escherichia coli ECRC102 1.00 NIAGMN_22135 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 NIAGMN_24745 potB spermidine/putrescine ABC transporter permease PotB — —
Escherichia coli ECRC100 1.00 OKFHMN_24190 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 OKFHMN_00620 potB spermidine/putrescine ABC transporter permease PotB low > 80
Escherichia coli ECOR27 1.00 NOLOHH_15535 mdtC multidrug efflux RND transporter permease subunit MdtC 0.98 NOLOHH_20940 potB spermidine/putrescine ABC transporter permease PotB low > 75
Escherichia coli BL21 1.00 ECD_01981 multidrug efflux system, subunit C 0.93 ECD_01123 spermidine/putrescine ABC transporter permease — —
Escherichia coli ECRC62 1.00 BNILDI_14450 mdtC multidrug efflux RND transporter permease subunit MdtC 0.98 BNILDI_19105 potB spermidine/putrescine ABC transporter permease PotB low > 75
Escherichia coli BW25113 0.99 b2076 mdtC multidrug efflux system, subunit C (NCBI) 0.93 b1125 potB spermidine/putrescine ABC transporter membrane protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01628 Multidrug resistance protein MdtC 0.98 OHPLBJKB_02543 Spermidine/putrescine transport system permease protein PotB low > 73
Escherichia coli ECOR38 0.99 HEPCGN_02880 mdtC multidrug efflux RND transporter permease subunit MdtC 0.98 HEPCGN_24070 potB spermidine/putrescine ABC transporter permease PotB low > 87
Escherichia fergusonii Becca 0.99 EFB2_01779 Multidrug resistance protein MdtC 0.98 EFB2_02850 Spermidine/putrescine transport system permease protein PotB low > 86
Enterobacter asburiae PDN3 0.92 EX28DRAFT_0482 Cation/multidrug efflux pump 0.93 EX28DRAFT_1805 ABC-type spermidine/putrescine transport system, permease component I low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_03062 Multidrug resistance protein MdtC 0.93 MPMX20_01806 Spermidine/putrescine transport system permease protein PotB low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.90 GFF3853 Multidrug transporter MdtC 0.97 GFF3409 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) low > 78
Klebsiella michiganensis M5al 0.90 BWI76_RS19260 multidrug transporter subunit MdtC 0.89 BWI76_RS11250 spermidine/putrescine ABC transporter permease PotB low > 92
Pectobacterium carotovorum WPP14 0.79 HER17_RS06315 multidrug efflux RND transporter permease subunit MdtC 0.81 HER17_RS11665 spermidine/putrescine ABC transporter permease PotB low > 75
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS19020 multidrug efflux RND transporter permease subunit 0.22 ABZR87_RS22465 ABC transporter permease low > 80
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_22900 acriflavine resistance protein B 0.35 AO353_25425 ABC transporter permease low > 101
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_3265 Acriflavin resistance plasma membrane protein 0.35 PfGW456L13_1568 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) low > 87
Desulfovibrio vulgaris Hildenborough JW710 0.43 DVU0438 AcrB/AcrD/AcrF family protein (TIGR) 0.48 DVU0097 potB polyamine ABC transporter, permease protein (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.43 DvMF_1515 acriflavin resistance protein (RefSeq) 0.49 DvMF_1959 binding-protein-dependent transport systems inner membrane component (RefSeq) low > 51
Caulobacter crescentus NA1000 Δfur 0.20 CCNA_03301 cation/multidrug efflux pump AcrB 0.35 CCNA_03238 ABC-type spermidine/putrescine transport system, permease component II low > 67
Caulobacter crescentus NA1000 0.20 CCNA_03301 cation/multidrug efflux pump AcrB 0.35 CCNA_03238 ABC-type spermidine/putrescine transport system, permease component II low > 66
Fusobacterium nucleatum SB010 0.16 HUW76_07660 efflux RND transporter permease subunit 0.31 HUW76_00745 ABC transporter permease low > 35

Not shown: 39 genomes with orthologs for JDDGAC_28300 only; 8 genomes with orthologs for JDDGAC_06745 only