Conservation of cofitness between HSERO_RS07340 and HSERO_RS23710 in Herbaspirillum seropedicae SmR1

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS07340 LysR family transcriptional regulator 1.0 HSERO_RS23710 response regulator GlrR 0.29 5
Acidovorax sp. GW101-3H11 0.41 Ac3H11_4371 LysR family transcriptional regulator YbhD 0.69 Ac3H11_4011 Putative sensory histidine kinase YfhA low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF2179 LysR family transcriptional regulator YbhD 0.70 GFF610 Putative sensory histidine kinase YfhA low > 90
Escherichia coli ECRC100 0.36 OKFHMN_06670 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.54 OKFHMN_21495 qseF two-component system response regulator QseF/GlrR low > 80
Escherichia coli ECOR27 0.35 NOLOHH_23100 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.54 NOLOHH_13170 qseF two-component system response regulator QseF/GlrR low > 75
Escherichia coli Nissle 1917 0.35 ECOLIN_RS04090 LysR family transcriptional regulator 0.54 ECOLIN_RS14455 two-component system response regulator GlrR — —
Escherichia coli ECRC98 0.35 JDDGAC_10325 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.54 JDDGAC_25160 qseF two-component system response regulator QseF/GlrR low > 86
Escherichia fergusonii Becca 0.35 EFB2_03338 Hydrogen peroxide-inducible genes activator 0.54 EFB2_01342 Transcriptional regulatory protein QseF low > 86
Escherichia coli BW25113 0.35 b0768 ybhD predicted DNA-binding transcriptional regulator (RefSeq) 0.54 b2554 yfhA predicted DNA-binding response regulator in two-component system (NCBI) low > 76
Escherichia coli ECOR38 0.35 HEPCGN_01605 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.54 HEPCGN_20640 qseF two-component system response regulator QseF/GlrR low > 87
Escherichia coli ECRC62 0.35 BNILDI_21095 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.54 BNILDI_11970 qseF two-component system response regulator QseF/GlrR low > 75
Escherichia coli ECRC101 0.35 MCAODC_25890 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.54 MCAODC_12025 qseF two-component system response regulator QseF/GlrR low > 87
Escherichia coli ECRC99 0.35 KEDOAH_21295 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.54 KEDOAH_06725 qseF two-component system response regulator QseF/GlrR — —
Escherichia coli ECRC102 0.35 NIAGMN_04720 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.54 NIAGMN_19265 qseF two-component system response regulator QseF/GlrR — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_02945 Hydrogen peroxide-inducible genes activator 0.54 OHPLBJKB_01153 Transcriptional regulatory protein GlrR low > 73
Klebsiella michiganensis M5al 0.34 BWI76_RS04365 LysR family transcriptional regulator 0.55 BWI76_RS21250 two-component system response regulator GlrR low > 92
Enterobacter asburiae PDN3 0.34 EX28DRAFT_0581 Transcriptional regulator 0.55 EX28DRAFT_0096 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains low > 76
Pantoea sp. MT58 0.33 IAI47_10140 LysR family transcriptional regulator 0.55 IAI47_04945 two-component system response regulator GlrR low > 76
Enterobacter sp. TBS_079 0.32 MPMX20_02971 HTH-type transcriptional regulator CynR 0.55 MPMX20_03423 Transcriptional regulatory protein QseF low > 85
Variovorax sp. SCN45 0.26 GFF6064 Transcriptional regulator YfeR, LysR family 0.71 GFF7323 Transcriptional response regulatory protein GlrR — —
Serratia liquefaciens MT49 0.24 IAI46_18415 LysR family transcriptional regulator 0.56 IAI46_19460 two-component system response regulator GlrR low > 86
Rahnella sp. WP5 0.24 EX31_RS20145 LysR family transcriptional regulator 0.56 EX31_RS20615 two-component system response regulator GlrR low > 89
Variovorax sp. OAS795 0.23 ABID97_RS27955 LysR family transcriptional regulator 0.71 ABID97_RS06460 sigma 54-interacting transcriptional regulator low > 91
Escherichia coli BL21 0.21 ECD_02308 transcriptional regulator of yefH 0.54 ECD_02446 response regulator regulating glmY sRNA in two-component system with sensor protein GlrK low > 61

Not shown: 21 genomes with orthologs for HSERO_RS07340 only; 14 genomes with orthologs for HSERO_RS23710 only