Conservation of cofitness between HSERO_RS17745 and HSERO_RS18635 in Herbaspirillum seropedicae SmR1

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS17745 hypothetical protein 1.0 HSERO_RS18635 signal transduction protein 0.31 18
Acidovorax sp. GW101-3H11 0.55 Ac3H11_2424 ATPase component BioM of energizing module of biotin ECF transporter 0.21 Ac3H11_3798 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) low > 79
Escherichia coli ECOR38 0.52 HEPCGN_09965 yjgR Uncharacterized protein YjgR 0.24 HEPCGN_06845 pdeB cyclic-guanylate-specific phosphodiesterase PdeB low > 87
Escherichia coli ECRC62 0.52 BNILDI_07475 yjgR Uncharacterized protein YjgR 0.24 BNILDI_22580 pdeB cyclic-guanylate-specific phosphodiesterase PdeB low > 75
Escherichia coli ECOR27 0.51 NOLOHH_04040 yjgR Uncharacterized protein YjgR 0.24 NOLOHH_01165 pdeB cyclic-guanylate-specific phosphodiesterase PdeB low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_03773 hypothetical protein 0.24 OHPLBJKB_03217 putative cyclic di-GMP phosphodiesterase PdeB low > 73
Escherichia coli BW25113 0.51 b4263 yjgR predicted ATPase (NCBI) 0.24 b0457 ylaB orf, hypothetical protein (VIMSS) low > 76
Escherichia coli BL21 0.51 ECD_04129 DUF853 family protein with NTPase fold 0.24 ECD_00408 putative membrane-anchored cyclic-di-GMP phosphodiesterase low > 61
Escherichia coli ECRC99 0.51 KEDOAH_16380 yjgR Uncharacterized protein YjgR 0.24 KEDOAH_19735 pdeB cyclic-guanylate-specific phosphodiesterase PdeB — —
Escherichia coli ECRC101 0.51 MCAODC_02280 yjgR Uncharacterized protein YjgR 0.24 MCAODC_27455 pdeB cyclic-guanylate-specific phosphodiesterase PdeB low > 87
Escherichia coli ECRC100 0.51 OKFHMN_11775 yjgR Uncharacterized protein YjgR 0.24 OKFHMN_08230 pdeB cyclic-guanylate-specific phosphodiesterase PdeB low > 80
Escherichia coli ECRC102 0.51 NIAGMN_09625 yjgR Uncharacterized protein YjgR 0.24 NIAGMN_06285 pdeB cyclic-guanylate-specific phosphodiesterase PdeB — —
Escherichia coli ECRC98 0.51 JDDGAC_15415 yjgR Uncharacterized protein YjgR 0.24 JDDGAC_11885 pdeB cyclic-guanylate-specific phosphodiesterase PdeB low > 86
Escherichia coli Nissle 1917 0.51 ECOLIN_RS24710 helicase HerA-like C-terminal domain-containing protein 0.24 ECOLIN_RS02725 cyclic-guanylate-specific phosphodiesterase PdeB low > 55
Escherichia fergusonii Becca 0.51 EFB2_04272 hypothetical protein 0.24 EFB2_03601 putative cyclic di-GMP phosphodiesterase PdeB low > 86
Enterobacter asburiae PDN3 0.50 EX28DRAFT_3273 Predicted ATPase 0.24 EX28DRAFT_2505 Predicted signal transduction protein containing sensor and EAL domains low > 76
Enterobacter sp. TBS_079 0.50 MPMX20_04124 hypothetical protein 0.25 MPMX20_01055 putative cyclic di-GMP phosphodiesterase PdeB low > 85
Klebsiella michiganensis M5al 0.50 BWI76_RS03060 ATP-binding protein 0.22 BWI76_RS06685 cyclic diguanylate phosphodiesterase (EAL) domain-containing protein 0.24 21
Rhizobium sp. OAE497 0.48 ABIE40_RS22125 helicase HerA-like C-terminal domain-containing protein 0.41 ABIE40_RS05110 EAL domain-containing protein low > 107
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.1948.1 ATPase component BioM of energizing module of biotin ECF transporter 0.36 Xcc-8004.4919.1 FIG01210508: hypothetical protein low > 74
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_17915 ATP-binding protein 0.23 AO356_11425 diguanylate phosphodiesterase low > 104
Pseudomonas putida KT2440 0.38 PP_1372 conserved protein of unknown function 0.23 PP_0131 putative membrane-anchored phosphodiesterase low > 96
Pseudomonas sp. RS175 0.38 PFR28_03433 hypothetical protein 0.22 PFR28_04632 putative cyclic di-GMP phosphodiesterase PdeB low > 88
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_1831 ATPase component BioM of energizing module of biotin ECF transporter 0.23 PfGW456L13_586 Rtn protein low > 87

Not shown: 34 genomes with orthologs for HSERO_RS17745 only; 7 genomes with orthologs for HSERO_RS18635 only