Conservation of cofitness between HSERO_RS05545 and HSERO_RS15070 in Herbaspirillum seropedicae SmR1

15 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS05545 transketolase 1.0 HSERO_RS15070 ribosomal large subunit pseudouridine synthase D 0.37 5
Enterobacter sp. TBS_079 0.74 MPMX20_03534 Apulose-4-phosphate transketolase subunit B 0.34 MPMX20_03463 Ribosomal large subunit pseudouridine synthase D low > 85
Dickeya dadantii 3937 0.73 DDA3937_RS08180 transketolase family protein 0.34 DDA3937_RS16110 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 74
Azospirillum sp. SherDot2 0.71 MPMX19_04769 Apulose-4-phosphate transketolase subunit B 0.29 MPMX19_05442 Ribosomal large subunit pseudouridine synthase D low > 112
Klebsiella michiganensis M5al 0.71 BWI76_RS08910 transketolase domain-containing protein 0.34 BWI76_RS21450 23S rRNA pseudouridine(1911/1915/1917) synthase low > 92
Sinorhizobium meliloti 1021 0.64 SMc00269 transketolase 0.29 SMc00647 ribosomal large subunit pseudouridine synthase low > 103
Fusobacterium nucleatum SB010 0.34 HUW76_02755 transketolase family protein 0.25 HUW76_08575 RluA family pseudouridine synthase
Echinicola vietnamensis KMM 6221, DSM 17526 0.31 Echvi_2926 Transketolase, C-terminal subunit 0.34 Echvi_0642 pseudouridine synthase, RluA family
Pontibacter actiniarum KMM 6156, DSM 19842 0.31 CA264_11960 transketolase 0.30 CA264_15205 RNA pseudouridine synthase
Methanococcus maripaludis S2 0.30 MMP_RS05750 transketolase family protein 0.18 MMP_RS05225 RluA family pseudouridine synthase
Methanococcus maripaludis JJ 0.30 MMJJ_RS08600 transketolase family protein 0.19 MMJJ_RS09155 RluA family pseudouridine synthase
Magnetospirillum magneticum AMB-1 0.24 AMB_RS00340 transketolase 0.31 AMB_RS16095 RluA family pseudouridine synthase
Rahnella sp. WP5 0.20 EX31_RS19490 transketolase family protein 0.34 EX31_RS07570 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 89
Enterobacter asburiae PDN3 0.19 EX28DRAFT_0311 Transketolase, C-terminal subunit 0.34 EX28DRAFT_2695 pseudouridine synthase, RluA family low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.19 GFF1903 Transketolase, C-terminal section (EC 2.2.1.1) 0.33 GFF4182 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) low > 78
Escherichia coli ECOR38 0.19 HEPCGN_10920 transketolase 0.34 HEPCGN_20375 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 87

Not shown: 16 genomes with orthologs for HSERO_RS05545 only; 45 genomes with orthologs for HSERO_RS15070 only