Conservation of cofitness between HSERO_RS10860 and HSERO_RS11120 in Herbaspirillum seropedicae SmR1

13 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS10860 RNA pseudouridylate synthase 1.0 HSERO_RS11120 LysR family transcriptional regulator 0.32 6
Variovorax sp. OAS795 0.65 ABID97_RS00980 pseudouridine synthase 0.42 ABID97_RS05470 LysR family transcriptional regulator — —
Variovorax sp. SCN45 0.64 GFF3530 Pseudouridine synthase 0.41 GFF885 Transcriptional regulator, LysR family low > 127
Pseudomonas sp. RS175 0.36 PFR28_00484 Dual-specificity RNA pseudouridine synthase RluF 0.25 PFR28_01326 HTH-type transcriptional regulator GltC low > 88
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_05610 RNA-binding protein 0.25 AO356_21655 LysR family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_3158 tRNA pseudouridine synthase A (EC 4.2.1.70) 0.24 Pf1N1B4_5832 LysR family transcriptional regulator near succinyl-CoA:3-ketoacid-coenzyme A transferase — —
Pseudomonas simiae WCS417 0.35 PS417_05870 RNA-binding protein S4 0.25 PS417_10530 LysR family transcriptional regulator low > 88
Pseudomonas fluorescens SBW25 0.35 PFLU_RS05940 RNA-binding protein S4 0.25 PFLU_RS10590 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS05940 RNA-binding protein S4 0.25 PFLU_RS10590 LysR family transcriptional regulator low > 109
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_1390 RNA-binding S4 0.23 Psyr_3236 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_1390 RNA-binding S4 0.23 Psyr_3236 transcriptional regulator, LysR family low > 86
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_16865 RNA-binding protein 0.26 AO353_27930 LysR family transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_2980 tRNA pseudouridine synthase A (EC 4.2.1.70) 0.25 Pf6N2E2_2110 LysR family transcriptional regulator near succinyl-CoA:3-ketoacid-coenzyme A transferase low > 103
Alteromonas macleodii MIT1002 0.25 MIT1002_01776 Ribosomal large subunit pseudouridine synthase F 0.21 MIT1002_02002 putative hydrogen peroxide-inducible genes activator low > 70

Not shown: 18 genomes with orthologs for HSERO_RS10860 only; 12 genomes with orthologs for HSERO_RS11120 only