Conservation of cofitness between HSERO_RS23495 and HSERO_RS01880 in Herbaspirillum seropedicae SmR1

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS23495 alpha/beta hydrolase 1.0 HSERO_RS01880 N-acetyl-anhydromuranmyl-L-alanine amidase 0.36 8
Pantoea sp. MT58 0.35 IAI47_19305 alpha/beta hydrolase 0.49 IAI47_15840 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD low > 76
Enterobacter sp. TBS_079 0.32 MPMX20_01192 hypothetical protein 0.50 MPMX20_00801 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD low > 85
Variovorax sp. SCN45 0.28 GFF2327 Hydrolase, alpha/beta fold family 0.46 GFF4433 1,6-anhydro-N-acetylmuramyl-L-alanine amidase low > 127
Variovorax sp. OAS795 0.27 ABID97_RS23830 alpha/beta fold hydrolase 0.45 ABID97_RS06410 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
Castellaniella sp019104865 MT123 0.22 ABCV34_RS02755 alpha/beta fold hydrolase 0.48 ABCV34_RS09025 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD low > 48
Dechlorosoma suillum PS 0.18 Dsui_2882 putative hydrolase or acyltransferase of alpha/beta superfamily 0.55 Dsui_0134 negative regulator of beta-lactamase expression low > 51
Escherichia coli Nissle 1917 0.14 ECOLIN_RS19490 pimeloyl-ACP methyl ester esterase BioH 0.49 ECOLIN_RS00590 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD 0.74 12
Escherichia coli BW25113 0.13 b3412 bioH carboxylesterase of pimeloyl-CoA synthesis (NCBI) 0.48 b0110 ampD N-acetyl-anhydromuranmyl-L-alanine amidase (NCBI) low > 76
Escherichia coli ECRC62 0.13 BNILDI_02730 bioH pimeloyl-ACP methyl ester esterase BioH 0.48 BNILDI_08740 ampD 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD low > 75
Escherichia coli BL21 0.13 ECD_03264 pimeloyl-ACP methyl ester carboxylesterase 0.48 ECD_00109 1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent; murein amidase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.13 OHPLBJKB_00291 Pimeloyl-[acyl-carrier protein] methyl ester esterase 0.48 OHPLBJKB_03551 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD low > 73
Escherichia coli ECOR38 0.13 HEPCGN_15810 bioH pimeloyl-ACP methyl ester esterase BioH 0.50 HEPCGN_08505 ampD 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD 0.43 84
Escherichia coli ECRC100 0.13 OKFHMN_17000 bioH pimeloyl-ACP methyl ester esterase BioH 0.49 OKFHMN_10525 ampD 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD low > 80
Escherichia coli ECRC98 0.13 JDDGAC_20630 bioH pimeloyl-ACP methyl ester esterase BioH 0.49 JDDGAC_14120 ampD 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD low > 86
Escherichia coli ECRC102 0.13 NIAGMN_14770 bioH pimeloyl-ACP methyl ester esterase BioH 0.49 NIAGMN_08375 ampD 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
Escherichia coli ECRC101 0.13 MCAODC_07530 bioH pimeloyl-ACP methyl ester esterase BioH 0.49 MCAODC_01040 ampD 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD low > 87
Escherichia coli ECRC99 0.13 KEDOAH_11140 bioH pimeloyl-ACP methyl ester esterase BioH 0.49 KEDOAH_17630 ampD 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
Klebsiella michiganensis M5al 0.13 BWI76_RS26630 pimeloyl-[acyl-carrier protein] methyl ester esterase 0.48 BWI76_RS04850 N-acetylmuramoyl-L-alanine amidase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.12 GFF605 Biotin synthesis protein BioH 0.48 GFF129 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD low > 78
Serratia liquefaciens MT49 0.11 IAI46_23825 pimeloyl-ACP methyl ester esterase BioH 0.49 IAI46_03535 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD low > 86

Not shown: 14 genomes with orthologs for HSERO_RS23495 only; 41 genomes with orthologs for HSERO_RS01880 only