Conservation of cofitness between HER17_RS00665 and HER17_RS20780 in Pectobacterium carotovorum WPP14

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00665 envelope stress response regulator transcription factor CpxR 1.0 HER17_RS20780 lipopolysaccharide heptosyltransferase RfaC 0.88 3
Pantoea sp. MT58 0.92 IAI47_00760 envelope stress response regulator transcription factor CpxR 0.73 IAI47_00680 lipopolysaccharide heptosyltransferase RfaC — —
Erwinia tracheiphila SCR3 0.92 LU632_RS21855 cpxR envelope stress response regulator transcription factor CpxR 0.70 LU632_RS21925 rfaC lipopolysaccharide heptosyltransferase RfaC — —
Rahnella sp. WP5 0.90 EX31_RS14320 envelope stress response regulator transcription factor CpxR 0.77 EX31_RS14405 lipopolysaccharide heptosyltransferase RfaC low > 89
Dickeya dadantii 3937 0.89 DDA3937_RS00780 envelope stress response regulator transcription factor CpxR 0.77 DDA3937_RS20450 lipopolysaccharide heptosyltransferase RfaC — —
Dickeya dianthicola 67-19 0.88 HGI48_RS20595 envelope stress response regulator transcription factor CpxR 0.77 HGI48_RS00760 lipopolysaccharide heptosyltransferase RfaC — —
Dickeya dianthicola ME23 0.88 DZA65_RS21610 envelope stress response regulator transcription factor CpxR 0.78 DZA65_RS00815 lipopolysaccharide heptosyltransferase RfaC — —
Enterobacter sp. TBS_079 0.86 MPMX20_04556 Transcriptional regulatory protein CpxR 0.72 MPMX20_00112 Lipopolysaccharide heptosyltransferase 1 — —
Enterobacter asburiae PDN3 0.86 EX28DRAFT_4387 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.71 EX28DRAFT_3873 lipopolysaccharide heptosyltransferase I — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF2280 Copper-sensing two-component system response regulator CpxR 0.70 GFF390 Lipopolysaccharide heptosyltransferase I (EC 2.4.1.-) low > 78
Escherichia coli ECRC62 0.85 BNILDI_05545 cpxR envelope stress response regulator transcription factor CpxR 0.71 BNILDI_03940 rfaC lipopolysaccharide heptosyltransferase RfaC — —
Escherichia coli ECRC99 0.85 KEDOAH_14310 cpxR envelope stress response regulator transcription factor CpxR 0.72 KEDOAH_12460 rfaC lipopolysaccharide heptosyltransferase RfaC — —
Escherichia coli ECRC100 0.85 OKFHMN_13845 cpxR envelope stress response regulator transcription factor CpxR 0.72 OKFHMN_15690 rfaC lipopolysaccharide heptosyltransferase RfaC — —
Escherichia coli Nissle 1917 0.85 ECOLIN_RS22540 envelope stress response regulator transcription factor CpxR 0.72 ECOLIN_RS20655 lipopolysaccharide heptosyltransferase RfaC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_04138 Transcriptional regulatory protein CpxR 0.71 OHPLBJKB_00079 Lipopolysaccharide heptosyltransferase 1 — —
Escherichia coli ECRC102 0.85 NIAGMN_11600 cpxR envelope stress response regulator transcription factor CpxR 0.72 NIAGMN_13450 rfaC lipopolysaccharide heptosyltransferase RfaC — —
Escherichia coli BW25113 0.85 b3912 cpxR DNA-binding response regulator in two-component regulatory system with CpxA (NCBI) 0.72 b3621 rfaC ADP-heptose:LPS heptosyl transferase I (NCBI) low > 76
Escherichia coli ECRC101 0.85 MCAODC_04345 cpxR envelope stress response regulator transcription factor CpxR 0.72 MCAODC_06200 rfaC lipopolysaccharide heptosyltransferase RfaC — —
Klebsiella michiganensis M5al 0.85 BWI76_RS00720 DNA-binding response regulator 0.68 BWI76_RS27270 ADP-heptose--LPS heptosyl transferase I — —
Escherichia coli BL21 0.85 ECD_03798 response regulator in two-component regulatory system with CpxA 0.71 ECD_03478 ADP-heptose:LPS heptosyl transferase I — —
Escherichia coli ECOR38 0.85 HEPCGN_12490 cpxR envelope stress response regulator transcription factor CpxR 0.71 HEPCGN_14535 rfaC lipopolysaccharide heptosyltransferase RfaC — —
Escherichia coli ECOR27 0.85 NOLOHH_05980 cpxR envelope stress response regulator transcription factor CpxR 0.73 NOLOHH_07570 rfaC lipopolysaccharide heptosyltransferase RfaC — —
Escherichia coli ECRC98 0.85 JDDGAC_17470 cpxR envelope stress response regulator transcription factor CpxR 0.72 JDDGAC_19315 rfaC lipopolysaccharide heptosyltransferase RfaC — —
Escherichia fergusonii Becca 0.85 EFB2_04705 Transcriptional regulatory protein CpxR 0.72 EFB2_00190 Lipopolysaccharide heptosyltransferase 1 — —
Serratia liquefaciens MT49 0.84 IAI46_24660 envelope stress response regulator transcription factor CpxR 0.77 IAI46_24745 lipopolysaccharide heptosyltransferase RfaC — —
Pseudomonas stutzeri RCH2 0.40 Psest_1884 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.49 Psest_0452 lipopolysaccharide heptosyltransferase I — —
Pseudomonas sp. S08-1 0.39 OH686_20775 Two-component transcriptional response regulator, LuxR family 0.48 OH686_09685 lipopolysaccharide heptosyltransferase I — —
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_3547 DNA-binding response regulator 0.51 Pf1N1B4_1472 Lipopolysaccharide heptosyltransferase I (EC 2.4.1.-) low > 87
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_4409 DNA-binding response regulator 0.51 PfGW456L13_211 Lipopolysaccharide heptosyltransferase I (EC 2.4.1.-) — —
Pseudomonas sp. RS175 0.39 PFR28_03323 Transcriptional regulatory protein CpxR 0.49 PFR28_05064 Lipopolysaccharide heptosyltransferase 1 — —

Not shown: 9 genomes with orthologs for HER17_RS00665 only; 26 genomes with orthologs for HER17_RS20780 only