Conservation of cofitness between HER17_RS06540 and HER17_RS19715 in Pectobacterium carotovorum WPP14

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS06540 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase 1.0 HER17_RS19715 2,5-didehydrogluconate reductase DkgA 0.57 7
Rahnella sp. WP5 0.59 EX31_RS14000 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase 0.71 EX31_RS08045 2,5-didehydrogluconate reductase DkgA low > 89
Serratia liquefaciens MT49 0.57 IAI46_11035 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase 0.77 IAI46_21755 2,5-didehydrogluconate reductase DkgA low > 86
Enterobacter asburiae PDN3 0.52 EX28DRAFT_4086 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family 0.73 EX28DRAFT_3050 Aldo/keto reductases, related to diketogulonate reductase low > 76
Enterobacter sp. TBS_079 0.51 MPMX20_04376 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase 0.73 MPMX20_03856 2,5-diketo-D-gluconic acid reductase A low > 85
Dickeya dadantii 3937 0.49 DDA3937_RS21370 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase 0.81 DDA3937_RS01795 2,5-didehydrogluconate reductase DkgA low > 74
Escherichia fergusonii Becca 0.49 EFB2_01599 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase 0.74 EFB2_00798 2,5-diketo-D-gluconic acid reductase A low > 86
Escherichia coli Nissle 1917 0.49 ECOLIN_RS13145 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase 0.74 ECOLIN_RS17340 2,5-didehydrogluconate reductase DkgA low > 55
Escherichia coli ECRC101 0.49 MCAODC_14015 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase 0.74 MCAODC_09450 dkgA 2,5-didehydrogluconate reductase DkgA low > 87
Escherichia coli ECRC98 0.49 JDDGAC_26940 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase 0.74 JDDGAC_22570 dkgA 2,5-didehydrogluconate reductase DkgA low > 86
Escherichia coli ECRC99 0.49 KEDOAH_05220 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase 0.74 KEDOAH_09210 dkgA 2,5-didehydrogluconate reductase DkgA
Escherichia coli ECRC102 0.49 NIAGMN_20745 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase 0.74 NIAGMN_16700 dkgA 2,5-didehydrogluconate reductase DkgA
Escherichia coli ECRC100 0.49 OKFHMN_22975 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase 0.74 OKFHMN_18935 dkgA 2,5-didehydrogluconate reductase DkgA low > 80
Escherichia coli ECOR38 0.49 HEPCGN_22190 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase 0.75 HEPCGN_17800 dkgA 2,5-didehydrogluconate reductase DkgA low > 87
Klebsiella michiganensis M5al 0.49 BWI76_RS26465 4-amino-4-deoxy-L-arabinose lipid A transferase 0.75 BWI76_RS24305 2,5-didehydrogluconate reductase A low > 92
Dickeya dianthicola 67-19 0.49 HGI48_RS21645 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase 0.81 HGI48_RS01690 2,5-didehydrogluconate reductase DkgA low > 71
Escherichia coli ECOR27 0.48 NOLOHH_14600 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase 0.75 NOLOHH_10710 dkgA 2,5-didehydrogluconate reductase DkgA low > 75
Pantoea sp. MT58 0.48 IAI47_21605 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase 0.73 IAI47_03200 2,5-didehydrogluconate reductase DkgA low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_01454 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase 0.75 OHPLBJKB_00689 2,5-diketo-D-gluconic acid reductase A low > 73
Dickeya dianthicola ME23 0.48 DZA65_RS22630 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase 0.81 DZA65_RS01765 2,5-didehydrogluconate reductase DkgA low > 75
Escherichia coli BL21 0.48 ECD_02183 4-amino-4-deoxy-L-arabinose transferase 0.75 ECD_02885 2,5-diketo-D-gluconate reductase A low > 61
Escherichia coli BW25113 0.48 b2257 arnT 4-amino-4-deoxy-L-arabinose transferase (NCBI) 0.75 b3012 yqhE orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECRC62 0.48 BNILDI_13515 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase 0.75 BNILDI_00805 dkgA 2,5-didehydrogluconate reductase DkgA low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF1862 Polymyxin resistance protein ArnT, undecaprenyl phosphate-alpha-L-Ara4N transferase; Melittin resistance protein PqaB 0.70 GFF3125 Methylglyoxal reductase, acetol producing (EC 1.1.1.-) / 2,5-diketo-D-gluconate reductase A (EC 1.1.1.274) low > 78
Pseudomonas simiae WCS417 0.40 PS417_13805 4-amino-4-deoxy-L-arabinose transferase 0.33 PS417_10670 2,5-diketo-D-gluconic acid reductase low > 88
Pseudomonas fluorescens SBW25 0.40 PFLU_RS14815 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase 0.33 PFLU_RS10735 2,5-didehydrogluconate reductase DkgB low > 109
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS14815 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase 0.33 PFLU_RS10735 2,5-didehydrogluconate reductase DkgB low > 109
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_25505 4-amino-4-deoxy-L-arabinose transferase 0.33 AO353_19655 2,5-diketo-D-gluconic acid reductase low > 101
Pontibacter actiniarum KMM 6156, DSM 19842 0.11 CA264_20180 phospholipid carrier-dependent glycosyltransferase 0.34 CA264_18320 2,5-didehydrogluconate reductase low > 74

Not shown: 4 genomes with orthologs for HER17_RS06540 only; 41 genomes with orthologs for HER17_RS19715 only