Conservation of cofitness between HER17_RS19710 and HER17_RS15535 in Pectobacterium carotovorum WPP14

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS19710 alcohol dehydrogenase 1.0 HER17_RS15535 o-succinylbenzoate--CoA ligase 0.52 11
Serratia liquefaciens MT49 0.81 IAI46_21750 alcohol dehydrogenase 0.54 IAI46_17540 o-succinylbenzoate--CoA ligase low > 86
Dickeya dadantii 3937 0.81 DDA3937_RS01800 alcohol dehydrogenase 0.64 DDA3937_RS05935 o-succinylbenzoate--CoA ligase low > 74
Dickeya dianthicola 67-19 0.81 HGI48_RS01695 alcohol dehydrogenase 0.64 HGI48_RS05980 o-succinylbenzoate--CoA ligase low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS01770 alcohol dehydrogenase 0.64 DZA65_RS06315 o-succinylbenzoate--CoA ligase low > 75
Enterobacter sp. TBS_079 0.76 MPMX20_03855 Alcohol dehydrogenase YqhD 0.50 MPMX20_03196 2-succinylbenzoate--CoA ligase low > 85
Escherichia coli BL21 0.76 ECD_02884 aldehyde reductase, NADPH-dependent 0.47 ECD_02187 O-succinylbenzoate-CoA ligase low > 61
Escherichia fergusonii Becca 0.76 EFB2_00799 Alcohol dehydrogenase YqhD 0.48 EFB2_01595 2-succinylbenzoate--CoA ligase low > 86
Escherichia coli ECRC62 0.76 BNILDI_00795 yqhD alcohol dehydrogenase 0.47 BNILDI_13495 menE o-succinylbenzoate--CoA ligase low > 75
Escherichia coli ECOR38 0.76 HEPCGN_17810 yqhD alcohol dehydrogenase 0.48 HEPCGN_22170 menE o-succinylbenzoate--CoA ligase low > 87
Escherichia coli BW25113 0.76 b3011 yqhD alcohol dehydrogenase, NAD(P)-dependent (NCBI) 0.47 b2260 menE O-succinylbenzoic acid--CoA ligase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.76 OHPLBJKB_00690 Alcohol dehydrogenase YqhD 0.47 OHPLBJKB_01450 2-succinylbenzoate--CoA ligase low > 73
Klebsiella michiganensis M5al 0.76 BWI76_RS24300 NADH-dependent alcohol dehydrogenase 0.49 BWI76_RS20055 2-succinylbenzoate-CoA ligase low > 92
Enterobacter asburiae PDN3 0.76 EX28DRAFT_3049 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family 0.50 EX28DRAFT_0344 O-succinylbenzoate-CoA ligase low > 76
Escherichia coli ECRC99 0.76 KEDOAH_09200 yqhD alcohol dehydrogenase 0.47 KEDOAH_05240 menE o-succinylbenzoate--CoA ligase — —
Escherichia coli ECRC101 0.76 MCAODC_09460 yqhD alcohol dehydrogenase 0.47 MCAODC_13995 menE o-succinylbenzoate--CoA ligase low > 87
Escherichia coli ECRC100 0.76 OKFHMN_18945 yqhD alcohol dehydrogenase 0.47 OKFHMN_22955 menE o-succinylbenzoate--CoA ligase low > 80
Escherichia coli ECRC98 0.76 JDDGAC_22580 yqhD alcohol dehydrogenase 0.47 JDDGAC_26920 menE o-succinylbenzoate--CoA ligase low > 86
Escherichia coli ECOR27 0.76 NOLOHH_10720 yqhD alcohol dehydrogenase 0.47 NOLOHH_14580 menE o-succinylbenzoate--CoA ligase low > 75
Escherichia coli ECRC102 0.76 NIAGMN_16710 yqhD alcohol dehydrogenase 0.47 NIAGMN_20725 menE o-succinylbenzoate--CoA ligase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF3124 NADPH-dependent broad range aldehyde dehydrogenase YqhD 0.51 GFF1866 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) low > 78
Escherichia coli Nissle 1917 0.75 ECOLIN_RS17335 alcohol dehydrogenase 0.48 ECOLIN_RS13165 o-succinylbenzoate--CoA ligase low > 55
Shewanella sp. ANA-3 0.58 Shewana3_0261 iron-containing alcohol dehydrogenase (RefSeq) 0.26 Shewana3_3968 O-succinylbenzoate-CoA ligase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.58 SO4469 alcohol dehydrogenase, iron-containing (NCBI ptt file) 0.24 SO4576 O-succinylbenzoic acid--CoA ligase, putative (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.52 Shew_0070 iron-containing alcohol dehydrogenase (RefSeq) 0.26 Shew_3602 O-succinylbenzoate-CoA ligase (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_17690 NADH-dependent alcohol dehydrogenase 0.34 CSW01_09840 o-succinylbenzoate--CoA ligase low > 62

Not shown: 16 genomes with orthologs for HER17_RS19710 only; 3 genomes with orthologs for HER17_RS15535 only