Conservation of cofitness between HER17_RS05755 and HER17_RS14790 in Pectobacterium carotovorum WPP14

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS05755 uracil-DNA glycosylase 1.0 HER17_RS14790 efflux RND transporter periplasmic adaptor subunit 0.61 4
Dickeya dianthicola ME23 0.87 DZA65_RS16955 uracil-DNA glycosylase 0.24 DZA65_RS03610 efflux RND transporter periplasmic adaptor subunit low > 75
Dickeya dianthicola 67-19 0.87 HGI48_RS15875 uracil-DNA glycosylase 0.25 HGI48_RS03500 efflux RND transporter periplasmic adaptor subunit low > 71
Dickeya dadantii 3937 0.87 DDA3937_RS15790 uracil-DNA glycosylase 0.61 DDA3937_RS06580 efflux RND transporter periplasmic adaptor subunit low > 74
Serratia liquefaciens MT49 0.86 IAI46_19620 uracil-DNA glycosylase 0.54 IAI46_17970 efflux RND transporter periplasmic adaptor subunit low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_01126 Uracil-DNA glycosylase 0.26 OHPLBJKB_03135 Cation efflux system protein CusB low > 73
Escherichia coli ECRC101 0.79 MCAODC_11870 ung uracil-DNA glycosylase 0.26 MCAODC_26905 cusB Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB low > 87
Escherichia coli Nissle 1917 0.79 ECOLIN_RS14600 uracil-DNA glycosylase 0.26 ECOLIN_RS03140 Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB
Escherichia coli ECRC62 0.79 BNILDI_11815 ung uracil-DNA glycosylase 0.26 BNILDI_22080 cusB Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB low > 75
Escherichia coli ECOR27 0.79 NOLOHH_13010 ung uracil-DNA glycosylase 0.26 NOLOHH_24070 cusB Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB low > 75
Escherichia coli ECRC102 0.79 NIAGMN_19110 ung uracil-DNA glycosylase 0.26 NIAGMN_05745 cusB Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB
Escherichia fergusonii Becca 0.79 EFB2_01316 Uracil-DNA glycosylase 0.26 EFB2_03520 Cation efflux system protein CusB low > 86
Escherichia coli ECRC99 0.79 KEDOAH_06880 ung uracil-DNA glycosylase 0.26 KEDOAH_20280 cusB Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB
Escherichia coli BL21 0.79 ECD_02474 uracil-DNA-glycosylase 0.26 ECD_00535 copper/silver efflux system, membrane fusion protein low > 61
Escherichia coli ECRC98 0.79 JDDGAC_25005 ung uracil-DNA glycosylase 0.26 JDDGAC_11335 cusB Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB low > 86
Escherichia coli ECRC100 0.79 OKFHMN_21340 ung uracil-DNA glycosylase 0.26 OKFHMN_07690 cusB Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB low > 80
Escherichia coli BW25113 0.79 b2580 ung uracil-DNA glycosylase (NCBI) 0.26 b0574 cusB copper/silver efflux system, membrane fusion protein (NCBI) low > 76
Escherichia coli ECOR38 0.78 HEPCGN_20465 ung uracil-DNA glycosylase 0.26 HEPCGN_00600 cusB Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB low > 87
Enterobacter asburiae PDN3 0.77 EX28DRAFT_0067 Uracil-DNA glycosylase (EC 3.2.2.-) 0.24 EX28DRAFT_1168 RND family efflux transporter, MFP subunit low > 76
Klebsiella michiganensis M5al 0.76 BWI76_RS21380 uracil-DNA glycosylase 0.50 BWI76_RS15145 efflux transporter periplasmic adaptor subunit 0.14 87
Shewanella sp. ANA-3 0.62 Shewana3_3221 uracil-DNA glycosylase (RefSeq) 0.25 Shewana3_4299 copper/silver efflux system membrane fusion protein CusB (RefSeq) low > 73
Pseudomonas stutzeri RCH2 0.59 Psest_3107 uracil-DNA glycosylase 0.31 Psest_0597 RND family efflux transporter, MFP subunit low > 67
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_4530 Uracil-DNA glycosylase, family 1 0.31 PfGW456L13_3707 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family low > 87
Pseudomonas putida KT2440 0.58 PP_1413 Uracil-DNA glycosylase 0.28 PP_5386 Probable copper RND efflux membrane fusion protein, CzcB family low > 96
Kangiella aquimarina DSM 16071 0.57 B158DRAFT_1441 Uracil-DNA glycosylase (EC 3.2.2.-) 0.24 B158DRAFT_1691 RND family efflux transporter, MFP subunit low > 40
Rhodanobacter denitrificans FW104-10B01 0.55 LRK54_RS10940 uracil-DNA glycosylase 0.27 LRK54_RS01920 efflux RND transporter periplasmic adaptor subunit low > 59
Sphingomonas koreensis DSMZ 15582 0.53 Ga0059261_2524 Uracil-DNA glycosylase (EC 3.2.2.-) 0.33 Ga0059261_0466 RND family efflux transporter, MFP subunit low > 68
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF3112 Uracil-DNA glycosylase, family 1 0.32 GFF1130 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family
Acidovorax sp. GW101-3H11 0.37 Ac3H11_773 Uracil-DNA glycosylase, family 1 0.34 Ac3H11_4201 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family low > 79
Variovorax sp. SCN45 0.36 GFF5889 Uracil-DNA glycosylase, family 1 (EC 3.2.2.27) 0.32 GFF4057 Copper/silver efflux RND transporter, membrane fusion protein CusB low > 127

Not shown: 51 genomes with orthologs for HER17_RS05755 only; 7 genomes with orthologs for HER17_RS14790 only