Conservation of cofitness between HER17_RS02000 and HER17_RS13375 in Pectobacterium carotovorum WPP14

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02000 two-component system response regulator PmrA 1.0 HER17_RS13375 ABC transporter permease 0.65 6
Dickeya dianthicola 67-19 0.88 HGI48_RS19450 two-component system response regulator PmrA 0.74 HGI48_RS08765 ABC transporter permease low > 71
Dickeya dianthicola ME23 0.88 DZA65_RS20570 two-component system response regulator PmrA 0.73 DZA65_RS09055 ABC transporter permease low > 75
Dickeya dadantii 3937 0.87 DDA3937_RS19350 two-component system response regulator PmrA 0.74 DDA3937_RS08625 ABC transporter permease low > 74
Enterobacter asburiae PDN3 0.69 EX28DRAFT_3235 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.78 EX28DRAFT_2199 ABC-type multidrug transport system, permease component low > 76
Rahnella sp. WP5 0.67 EX31_RS08605 two-component system response regulator PmrA 0.75 EX31_RS00865 ABC transporter permease low > 89
Enterobacter sp. TBS_079 0.64 MPMX20_04087 Transcriptional regulatory protein BasR 0.76 MPMX20_01420 putative multidrug ABC transporter permease YbhR low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF1469 Transcriptional regulatory protein basR/pmrA 0.77 GFF691 ABC transport system, permease component YbhR low > 78
Escherichia fergusonii Becca 0.64 EFB2_04469 Transcriptional regulatory protein BasR 0.78 EFB2_03313 putative multidrug ABC transporter permease YbhR low > 86
Escherichia coli Nissle 1917 0.64 ECOLIN_RS23805 two-component system response regulator BasR 0.77 ECOLIN_RS04220 ABC transporter permease — —
Escherichia coli ECRC100 0.64 OKFHMN_12570 basR two-component system response regulator BasR 0.78 OKFHMN_06315 ybhR putative multidrug ABC transporter permease YbhR low > 80
Escherichia coli BW25113 0.64 b4113 basR DNA-binding response regulator in two-component regulatory system with BasS (NCBI) 0.78 b0792 ybhR predicted transporter subunit: membrane component of ABC superfamily (NCBI) low > 76
Escherichia coli ECOR38 0.64 HEPCGN_11205 basR two-component system response regulator BasR 0.78 HEPCGN_01725 ybhR putative multidrug ABC transporter permease YbhR low > 87
Escherichia coli ECRC98 0.63 JDDGAC_16205 basR two-component system response regulator BasR 0.78 JDDGAC_09950 ybhR putative multidrug ABC transporter permease YbhR low > 86
Escherichia coli BL21 0.63 ECD_03984 response regulator in two-component regulatory system with BasS 0.78 ECD_00759 putative ABC transporter permease low > 61
Escherichia coli ECOR27 0.63 NOLOHH_04835 basR two-component system response regulator BasR 0.78 NOLOHH_22670 ybhR putative multidrug ABC transporter permease YbhR low > 75
Escherichia coli ECRC99 0.63 KEDOAH_15595 basR two-component system response regulator BasR 0.78 KEDOAH_21595 ybhR putative multidrug ABC transporter permease YbhR — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.63 OHPLBJKB_03931 Transcriptional regulatory protein BasR 0.78 OHPLBJKB_02921 putative multidrug ABC transporter permease YbhR low > 73
Escherichia coli ECRC102 0.63 NIAGMN_10415 basR two-component system response regulator BasR 0.78 NIAGMN_04360 ybhR putative multidrug ABC transporter permease YbhR — —
Escherichia coli ECRC101 0.63 MCAODC_03080 basR two-component system response regulator BasR 0.78 MCAODC_25530 ybhR putative multidrug ABC transporter permease YbhR low > 87
Escherichia coli ECRC62 0.63 BNILDI_06655 basR two-component system response regulator BasR 0.78 BNILDI_20950 ybhR putative multidrug ABC transporter permease YbhR low > 75
Klebsiella michiganensis M5al 0.62 BWI76_RS08795 DNA-binding response regulator 0.78 BWI76_RS08865 ABC transporter inner membrane low > 92
Serratia liquefaciens MT49 0.57 IAI46_01870 two-component system response regulator PmrA 0.81 IAI46_06595 ABC transporter permease low > 86
Alteromonas macleodii MIT1002 0.41 MIT1002_00810 Transcriptional regulatory protein BasR 0.13 MIT1002_00921 Inner membrane transport permease YhhJ low > 70
Dechlorosoma suillum PS 0.41 Dsui_0266 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 0.22 Dsui_2340 ABC-type multidrug transport system, permease component low > 51
Magnetospirillum magneticum AMB-1 0.39 AMB_RS16365 DNA-binding response regulator 0.18 AMB_RS00930 ABC transporter permease low > 64
Rhodanobacter denitrificans FW104-10B01 0.39 LRK54_RS07600 response regulator 0.38 LRK54_RS14185 ABC transporter permease low > 59
Rhodanobacter denitrificans MT42 0.39 LRK55_RS07340 response regulator 0.37 LRK55_RS13905 ABC transporter permease low > 63

Not shown: 22 genomes with orthologs for HER17_RS02000 only; 26 genomes with orthologs for HER17_RS13375 only