Conservation of cofitness between HER17_RS10965 and HER17_RS12960 in Pectobacterium carotovorum WPP14

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS10965 acyl-CoA thioester hydrolase YciA 1.0 HER17_RS12960 DEAD/DEAH box helicase family protein 0.69 14
Dickeya dadantii 3937 0.89 DDA3937_RS10430 acyl-CoA thioester hydrolase YciA 0.82 DDA3937_RS09150 DEAD/DEAH box helicase low > 74
Dickeya dianthicola ME23 0.89 DZA65_RS10910 acyl-CoA thioester hydrolase YciA 0.80 DZA65_RS09490 DEAD/DEAH box helicase low > 75
Dickeya dianthicola 67-19 0.88 HGI48_RS10435 acyl-CoA thioester hydrolase YciA 0.80 HGI48_RS09190 DEAD/DEAH box helicase low > 71
Rahnella sp. WP5 0.85 EX31_RS10010 acyl-CoA thioester hydrolase YciA 0.79 EX31_RS19200 DEAD/DEAH box helicase low > 89
Serratia liquefaciens MT49 0.84 IAI46_14085 acyl-CoA thioester hydrolase YciA 0.82 IAI46_17350 DEAD/DEAH box helicase family protein low > 86
Enterobacter asburiae PDN3 0.80 EX28DRAFT_0923 Acyl-CoA hydrolase 0.79 EX28DRAFT_0377 DNA or RNA helicases of superfamily II low > 76
Pantoea sp. MT58 0.80 IAI47_09135 acyl-CoA thioester hydrolase YciA 0.79 IAI47_06580 DEAD/DEAH box helicase low > 76
Enterobacter sp. TBS_079 0.80 MPMX20_02575 putative acyl-CoA thioester hydrolase 0.79 MPMX20_03150 Putative DNA repair helicase RadD low > 85
Klebsiella michiganensis M5al 0.79 BWI76_RS11790 acyl-CoA thioesterase 0.79 BWI76_RS19815 ATP-dependent helicase low > 92
Escherichia coli ECOR38 0.79 HEPCGN_25145 yciA acyl-CoA thioester hydrolase YciA 0.79 HEPCGN_22620 radD Putative DNA repair helicase RadD low > 87
Escherichia coli ECOR27 0.79 NOLOHH_20370 yciA acyl-CoA thioester hydrolase YciA 0.79 NOLOHH_14930 radD Putative DNA repair helicase RadD low > 75
Escherichia coli ECRC62 0.79 BNILDI_18515 yciA acyl-CoA thioester hydrolase YciA 0.79 BNILDI_13850 radD Putative DNA repair helicase RadD low > 75
Escherichia coli BW25113 0.79 b1253 yciA predicted hydrolase (NCBI) 0.79 b2184 yejH DNA damage response helicase (yejH or radD) (from data) low > 76
Escherichia fergusonii Becca 0.79 EFB2_02672 putative acyl-CoA thioester hydrolase 0.79 EFB2_01672 Putative DNA repair helicase RadD low > 86
Escherichia coli BL21 0.79 ECD_01227 acyl-CoA esterase 0.79 ECD_02114 putative ATP-dependent DNA or RNA helicase low > 61
Escherichia coli Nissle 1917 0.79 ECOLIN_RS07565 acyl-CoA thioester hydrolase YciA 0.79 ECOLIN_RS12765 DEAD/DEAH box helicase low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_02430 putative acyl-CoA thioester hydrolase 0.78 OHPLBJKB_01525 Putative DNA repair helicase RadD low > 73
Escherichia coli ECRC102 0.79 NIAGMN_27555 yciA acyl-CoA thioester hydrolase YciA 0.79 NIAGMN_21120 radD Putative DNA repair helicase RadD — —
Escherichia coli ECRC98 0.79 JDDGAC_05895 yciA acyl-CoA thioester hydrolase YciA 0.79 JDDGAC_27315 radD Putative DNA repair helicase RadD low > 86
Escherichia coli ECRC101 0.79 MCAODC_21580 yciA acyl-CoA thioester hydrolase YciA 0.79 MCAODC_14405 radD Putative DNA repair helicase RadD low > 87
Escherichia coli ECRC99 0.79 KEDOAH_25675 yciA acyl-CoA thioester hydrolase YciA 0.79 KEDOAH_04830 radD Putative DNA repair helicase RadD — —
Escherichia coli ECRC100 0.79 OKFHMN_28680 yciA acyl-CoA thioester hydrolase YciA 0.79 OKFHMN_23355 radD Putative DNA repair helicase RadD low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF2735 Acyl-CoA thioesterase YciA, involved in membrane biogenesis 0.79 GFF3752 ATP-dependent RNA helicase YejH low > 78
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_08560 acyl-CoA thioester hydrolase YciA 0.58 CSW01_08225 ATP-dependent helicase low > 62
Marinobacter adhaerens HP15 0.43 HP15_3390 thioesterase superfamily protein 0.58 HP15_2832 DNA damage response helicase (yejH or radD) (from data) low > 73

Not shown: 45 genomes with orthologs for HER17_RS10965 only; 5 genomes with orthologs for HER17_RS12960 only