Conservation of cofitness between HER17_RS12215 and HER17_RS11980 in Pectobacterium carotovorum WPP14

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12215 SDR family oxidoreductase 1.0 HER17_RS11980 membrane integrity-associated transporter subunit PqiA 0.68 2
Serratia liquefaciens MT49 0.67 IAI46_08225 SDR family oxidoreductase 0.75 IAI46_08830 membrane integrity-associated transporter subunit PqiA low > 86
Dickeya dadantii 3937 0.66 DDA3937_RS09745 SDR family oxidoreductase 0.71 DDA3937_RS12830 membrane integrity-associated transporter subunit PqiA low > 74
Pantoea sp. MT58 0.66 IAI47_07105 SDR family oxidoreductase 0.65 IAI47_12680 membrane integrity-associated transporter subunit PqiA low > 76
Dickeya dianthicola 67-19 0.66 HGI48_RS09760 SDR family oxidoreductase 0.71 HGI48_RS12900 membrane integrity-associated transporter subunit PqiA low > 71
Erwinia tracheiphila SCR3 0.66 LU632_RS08960 SDR family oxidoreductase 0.64 LU632_RS09975 pqiA membrane integrity-associated transporter subunit PqiA low > 74
Dickeya dianthicola ME23 0.65 DZA65_RS10070 SDR family oxidoreductase 0.71 DZA65_RS13365 membrane integrity-associated transporter subunit PqiA low > 75
Escherichia coli ECRC62 0.65 BNILDI_14755 yeeZ Protein YeeZ 0.66 BNILDI_19990 pqiA membrane integrity-associated transporter subunit PqiA low > 75
Rahnella sp. WP5 0.65 EX31_RS11430 SDR family oxidoreductase 0.68 EX31_RS18070 membrane integrity-associated transporter subunit PqiA low > 89
Enterobacter sp. TBS_079 0.64 MPMX20_03000 Protein YeeZ 0.65 MPMX20_01601 Intermembrane transport protein PqiA low > 85
Klebsiella michiganensis M5al 0.63 BWI76_RS18915 NAD(P)-dependent oxidoreductase 0.69 BWI76_RS09935 paraquat-inducible membrane protein A low > 92
Escherichia coli BW25113 0.62 b2016 yeeZ predicted epimerase, with NAD(P)-binding Rossmann-fold domain (NCBI) 0.66 b0950 pqiA paraquat-inducible membrane protein A (NCBI) low > 76
Escherichia coli ECRC99 0.62 KEDOAH_03620 yeeZ Protein YeeZ 0.66 KEDOAH_22465 pqiA membrane integrity-associated transporter subunit PqiA — —
Escherichia coli ECOR38 0.62 HEPCGN_03235 yeeZ Protein YeeZ 0.66 HEPCGN_23250 pqiA membrane integrity-associated transporter subunit PqiA low > 87
Enterobacter asburiae PDN3 0.62 EX28DRAFT_0542 Nucleoside-diphosphate-sugar epimerases 0.65 EX28DRAFT_1993 integral membrane protein, PqiA family low > 76
Escherichia coli ECRC101 0.62 MCAODC_20410 yeeZ Protein YeeZ 0.66 MCAODC_24660 pqiA membrane integrity-associated transporter subunit PqiA low > 87
Escherichia coli ECRC100 0.62 OKFHMN_24530 yeeZ Protein YeeZ 0.66 OKFHMN_05270 pqiA membrane integrity-associated transporter subunit PqiA low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_01684 Protein YeeZ 0.66 OHPLBJKB_02716 Paraquat-inducible protein A low > 73
Escherichia coli ECOR27 0.62 NOLOHH_15855 yeeZ Protein YeeZ 0.66 NOLOHH_21825 pqiA membrane integrity-associated transporter subunit PqiA low > 75
Escherichia coli BL21 0.62 ECD_01919 putative epimerase 0.66 ECD_00954 paraquat-inducible, SoxRS-regulated inner membrane protein low > 61
Escherichia coli ECRC102 0.62 NIAGMN_22475 yeeZ Protein YeeZ 0.66 NIAGMN_02990 pqiA membrane integrity-associated transporter subunit PqiA — —
Escherichia fergusonii Becca 0.62 EFB2_01840 Protein YeeZ 0.66 EFB2_03121 Intermembrane transport protein PqiA low > 86
Escherichia coli ECRC98 0.61 JDDGAC_28640 yeeZ Protein YeeZ 0.66 JDDGAC_08880 pqiA membrane integrity-associated transporter subunit PqiA low > 86
Escherichia coli Nissle 1917 0.61 ECOLIN_RS11925 SDR family oxidoreductase 0.66 ECOLIN_RS04990 membrane integrity-associated transporter subunit PqiA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF3914 Nucleoside-diphosphate-sugar epimerases 0.67 GFF3241 Paraquat-inducible protein A low > 78
Shewanella sp. ANA-3 0.33 Shewana3_1572 NAD-dependent epimerase/dehydratase (RefSeq) 0.31 Shewana3_1919 PqiA family integral membrane protein (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.23 MIT1002_03425 UDP-glucose 4-epimerase 0.29 MIT1002_01369 Paraquat-inducible protein A low > 70
Vibrio cholerae E7946 ATCC 55056 0.17 CSW01_08540 NAD(P)-dependent oxidoreductase 0.35 CSW01_08795 paraquat-inducible protein A low > 62
Azospirillum sp. SherDot2 0.10 MPMX19_02719 Protein YeeZ 0.23 MPMX19_05101 Intermembrane transport protein PqiA low > 112

Not shown: 17 genomes with orthologs for HER17_RS12215 only; 4 genomes with orthologs for HER17_RS11980 only