Conservation of cofitness between HER17_RS12895 and HER17_RS08550 in Pectobacterium carotovorum WPP14

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12895 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 1.0 HER17_RS08550 glucan biosynthesis protein G 0.81 4
Serratia liquefaciens MT49 0.80 IAI46_17305 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.86 IAI46_09605 glucan biosynthesis protein G low > 86
Erwinia tracheiphila SCR3 0.75 LU632_RS17465 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.80 LU632_RS10270 glucan biosynthesis protein G low > 74
Rahnella sp. WP5 0.74 EX31_RS19120 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.82 EX31_RS24250 glucan biosynthesis protein G low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF3761 Lipoprotein spr precursor 0.82 GFF3328 Glucans biosynthesis protein G precursor low > 78
Dickeya dadantii 3937 0.72 DDA3937_RS09195 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.88 DDA3937_RS13220 glucan biosynthesis protein G low > 74
Enterobacter sp. TBS_079 0.72 MPMX20_03141 Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase 0.80 MPMX20_01729 Glucans biosynthesis protein G 0.42 52
Dickeya dianthicola ME23 0.72 DZA65_RS09540 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.88 DZA65_RS13755 glucan biosynthesis protein G low > 75
Dickeya dianthicola 67-19 0.72 HGI48_RS09235 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.88 HGI48_RS13280 glucan biosynthesis protein G low > 71
Enterobacter asburiae PDN3 0.71 EX28DRAFT_0386 Cell wall-associated hydrolases (invasion-associated proteins) 0.80 EX28DRAFT_1882 Periplasmic glucans biosynthesis protein low > 76
Escherichia coli ECRC99 0.71 KEDOAH_04785 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.81 KEDOAH_23955 mdoG glucans biosynthesis protein MdoG — —
Escherichia coli ECRC100 0.71 OKFHMN_23400 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.81 OKFHMN_03800 mdoG glucans biosynthesis protein MdoG low > 80
Escherichia fergusonii Becca 0.71 EFB2_01681 Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase 0.81 EFB2_02925 Glucans biosynthesis protein G low > 86
Escherichia coli ECRC98 0.71 JDDGAC_27360 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.81 JDDGAC_07460 mdoG glucans biosynthesis protein MdoG low > 86
Escherichia coli BW25113 0.71 b2175 spr predicted peptidase, outer membrane lipoprotein (NCBI) 0.81 b1048 mdoG glucan biosynthesis protein, periplasmic (NCBI) 0.28 48
Escherichia coli ECRC102 0.71 NIAGMN_21165 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.81 NIAGMN_24030 mdoG glucans biosynthesis protein MdoG — —
Escherichia coli ECRC62 0.71 BNILDI_13895 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.81 BNILDI_19490 mdoG glucans biosynthesis protein MdoG low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_01534 Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase 0.81 OHPLBJKB_02616 Glucans biosynthesis protein G low > 73
Escherichia coli ECRC101 0.71 MCAODC_14450 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.81 MCAODC_23160 mdoG glucans biosynthesis protein MdoG low > 87
Escherichia coli ECOR27 0.71 NOLOHH_14975 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.81 NOLOHH_21330 mdoG glucans biosynthesis protein MdoG low > 75
Escherichia coli Nissle 1917 0.71 ECOLIN_RS12720 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.81 ECOLIN_RS06090 glucans biosynthesis protein MdoG — —
Escherichia coli BL21 0.71 ECD_02105 murein DD-endopeptidase, space-maker hydrolase, mutational suppressor of prc thermosensitivity, outer membrane lipoprotein, weak murein LD-carboxypeptidase 0.81 ECD_01045 OPG biosynthetic periplasmic beta-1,6 branching glycosyltransferase low > 61
Escherichia coli ECOR38 0.71 HEPCGN_22665 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.81 HEPCGN_23690 mdoG glucans biosynthesis protein MdoG low > 87
Klebsiella michiganensis M5al 0.71 BWI76_RS19770 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.80 BWI76_RS10930 glucan biosynthesis protein G 0.51 8
Pantoea sp. MT58 0.67 IAI47_06625 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.79 IAI47_12280 glucan biosynthesis protein G low > 76
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_02660 peptidase P60 0.73 AO353_12310 glucan biosynthesis protein G 0.38 49
Pseudomonas sp. RS175 0.26 PFR28_03213 Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase 0.75 PFR28_04978 Glucans biosynthesis protein G low > 88
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_19115 peptidase P60 0.75 AO356_09565 glucan biosynthesis protein G 0.51 20

Not shown: 7 genomes with orthologs for HER17_RS12895 only; 32 genomes with orthologs for HER17_RS08550 only