Conservation of cofitness between HER17_RS21560 and HER17_RS05865 in Pectobacterium carotovorum WPP14

12 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS21560 response regulator 1.0 HER17_RS05865 TolC family outer membrane protein 0.58 12
Escherichia coli Nissle 1917 0.70 ECOLIN_RS17425 quorum sensing response regulator transcription factor QseB 0.07 ECOLIN_RS01685 TolC family protein low > 55
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF700 Two-component system response regulator QseB 0.10 GFF2373 Type I secretion system, outer membrane component LapE
Pseudomonas sp. S08-1 0.51 OH686_04665 Two-component system response regulator QseB 0.47 OH686_20630 Type I secretion outer membrane protein, TolC family or Type I secretion system, outer membrane component LapE low > 80
Pseudomonas sp. RS175 0.50 PFR28_02328 Transcriptional regulatory protein QseB 0.57 PFR28_04786 Outer membrane efflux protein BepC low > 88
Pseudomonas fluorescens GW456-L13 0.49 PfGW456L13_3169 Two-component system response regulator QseB 0.56 PfGW456L13_535 Type I secretion system, outer membrane component LapE low > 87
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_23845 XRE family transcriptional regulator 0.56 AO356_10565 channel protein TolC low > 104
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_1539 Two-component system response regulator QseB 0.56 Pf6N2E2_3980 Type I secretion system, outer membrane component LapE 0.22 52
Pseudomonas fluorescens FW300-N1B4 0.49 Pf1N1B4_4454 Two-component system response regulator QseB 0.57 Pf1N1B4_1798 Type I secretion system, outer membrane component LapE
Pseudomonas putida KT2440 0.48 PP_2713 DNA-binding response regulator 0.45 PP_4519 Agglutination protein low > 96
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_19370 transcriptional regulator 0.58 AO353_11185 channel protein TolC low > 101
Shewanella oneidensis MR-1 0.42 SO2104 DNA-binding response regulator YgiX, putative (NCBI ptt file) 0.30 SO4320 aggA agglutination protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.41 Shewana3_1885 two component transcriptional regulator (RefSeq) 0.31 Shewana3_0379 TolC family type I secretion outer membrane protein (RefSeq) low > 73

Not shown: 51 genomes with orthologs for HER17_RS21560 only; 12 genomes with orthologs for HER17_RS05865 only