Conservation of cofitness between HER17_RS16590 and HER17_RS05390 in Pectobacterium carotovorum WPP14

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS16590 DNA mismatch repair endonuclease MutH 1.0 HER17_RS05390 ribosome-associated translation inhibitor RaiA 0.59 10
Dickeya dadantii 3937 0.82 DDA3937_RS04940 DNA mismatch repair endonuclease MutH 0.87 DDA3937_RS16120 ribosome-associated translation inhibitor RaiA low > 74
Dickeya dianthicola ME23 0.82 DZA65_RS05285 DNA mismatch repair endonuclease MutH 0.87 DZA65_RS17340 ribosome-associated translation inhibitor RaiA low > 75
Dickeya dianthicola 67-19 0.82 HGI48_RS04950 DNA mismatch repair endonuclease MutH 0.87 HGI48_RS16245 ribosome-associated translation inhibitor RaiA — —
Serratia liquefaciens MT49 0.77 IAI46_20460 DNA mismatch repair endonuclease MutH 0.82 IAI46_03975 ribosome-associated translation inhibitor RaiA low > 86
Rahnella sp. WP5 0.77 EX31_RS13210 DNA mismatch repair endonuclease MutH 0.86 EX31_RS07580 ribosome-associated translation inhibitor RaiA low > 89
Enterobacter asburiae PDN3 0.75 EX28DRAFT_2906 DNA mismatch repair protein MutH 0.81 EX28DRAFT_2697 ribosomal subunit interface protein 0.56 76
Enterobacter sp. TBS_079 0.74 MPMX20_03694 DNA mismatch repair protein MutH 0.81 MPMX20_03465 Ribosome-associated inhibitor A low > 85
Erwinia tracheiphila SCR3 0.73 LU632_RS06095 mutH DNA mismatch repair endonuclease MutH 0.76 LU632_RS16955 raiA ribosome-associated translation inhibitor RaiA low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF1314 DNA mismatch repair endonuclease MutH 0.82 GFF4180 Ribosome hibernation protein YfiA low > 78
Escherichia coli ECRC101 0.73 MCAODC_10515 mutH DNA mismatch repair endonuclease MutH 0.81 MCAODC_11765 raiA ribosome-associated translation inhibitor RaiA low > 87
Escherichia coli ECRC98 0.73 JDDGAC_23655 mutH DNA mismatch repair endonuclease MutH 0.81 JDDGAC_24900 raiA ribosome-associated translation inhibitor RaiA low > 86
Escherichia coli ECOR27 0.73 NOLOHH_11875 mutH DNA mismatch repair endonuclease MutH 0.81 NOLOHH_12910 raiA ribosome-associated translation inhibitor RaiA low > 75
Escherichia coli ECOR38 0.73 HEPCGN_19245 mutH DNA mismatch repair endonuclease MutH 0.81 HEPCGN_20355 raiA ribosome-associated translation inhibitor RaiA low > 87
Escherichia fergusonii Becca 0.73 EFB2_01052 DNA mismatch repair protein MutH 0.81 EFB2_01294 Ribosome-associated inhibitor A low > 86
Escherichia coli ECRC99 0.73 KEDOAH_08140 mutH DNA mismatch repair endonuclease MutH 0.81 KEDOAH_06985 raiA ribosome-associated translation inhibitor RaiA — —
Escherichia coli ECRC102 0.73 NIAGMN_17760 mutH DNA mismatch repair endonuclease MutH 0.81 NIAGMN_19005 raiA ribosome-associated translation inhibitor RaiA — —
Escherichia coli ECRC100 0.73 OKFHMN_19990 mutH DNA mismatch repair endonuclease MutH 0.81 OKFHMN_21235 raiA ribosome-associated translation inhibitor RaiA low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_00898 DNA mismatch repair protein MutH 0.81 OHPLBJKB_01110 Ribosome-associated inhibitor A low > 73
Escherichia coli BL21 0.73 ECD_02679 methyl-directed mismatch repair protein 0.81 ECD_02486 cold shock protein associated with 30S ribosomal subunit low > 61
Pantoea sp. MT58 0.73 IAI47_03910 DNA mismatch repair endonuclease MutH 0.77 IAI47_04415 ribosome-associated translation inhibitor RaiA low > 76
Escherichia coli Nissle 1917 0.73 ECOLIN_RS15895 DNA mismatch repair endonuclease MutH 0.81 ECOLIN_RS14690 ribosome-associated translation inhibitor RaiA — —
Escherichia coli BW25113 0.73 b2831 mutH DNA mismatch repair protein (NCBI) 0.81 b2597 yfiA cold shock protein associated with 30S ribosomal subunit (NCBI) low > 76
Escherichia coli ECRC62 0.72 BNILDI_10355 mutH DNA mismatch repair endonuclease MutH 0.81 BNILDI_11715 raiA ribosome-associated translation inhibitor RaiA low > 75
Klebsiella michiganensis M5al 0.72 BWI76_RS23290 DNA mismatch repair protein MutH 0.82 BWI76_RS21460 translation inhibitor protein RaiA low > 92
Vibrio cholerae E7946 ATCC 55056 0.63 CSW01_03515 DNA mismatch repair protein MutH 0.46 CSW01_03685 ribosomal subunit interface protein low > 62
Shewanella amazonensis SB2B 0.56 Sama_0862 DNA mismatch repair protein (RefSeq) 0.41 Sama_0899 ribosomal subunit interface protein (RefSeq) low > 62

Not shown: 5 genomes with orthologs for HER17_RS16590 only; 0 genomes with orthologs for HER17_RS05390 only