Conservation of cofitness between HER17_RS11980 and HER17_RS04875 in Pectobacterium carotovorum WPP14

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS11980 membrane integrity-associated transporter subunit PqiA 1.0 HER17_RS04875 type VI secretion system baseplate subunit TssK 0.74 20
Serratia liquefaciens MT49 0.75 IAI46_08830 membrane integrity-associated transporter subunit PqiA 0.13 IAI46_05585 type VI secretion system baseplate subunit TssK low > 86
Dickeya dadantii 3937 0.71 DDA3937_RS12830 membrane integrity-associated transporter subunit PqiA 0.93 DDA3937_RS07050 type VI secretion system baseplate subunit TssK low > 74
Dickeya dianthicola ME23 0.71 DZA65_RS13365 membrane integrity-associated transporter subunit PqiA 0.92 DZA65_RS08575 type VI secretion system baseplate subunit TssK low > 75
Dickeya dianthicola 67-19 0.71 HGI48_RS12900 membrane integrity-associated transporter subunit PqiA 0.93 HGI48_RS07980 type VI secretion system baseplate subunit TssK low > 71
Rahnella sp. WP5 0.68 EX31_RS18070 membrane integrity-associated transporter subunit PqiA 0.15 EX31_RS01860 type VI secretion system baseplate subunit TssK low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF3241 Paraquat-inducible protein A 0.30 GFF4064 Uncharacterized protein ImpJ/VasE low > 78
Escherichia coli ECOR27 0.66 NOLOHH_21825 pqiA membrane integrity-associated transporter subunit PqiA 0.45 NOLOHH_02250 tssK type VI secretion system baseplate subunit TssK low > 75
Escherichia fergusonii Becca 0.66 EFB2_03121 Intermembrane transport protein PqiA 0.44 EFB2_03818 hypothetical protein low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_02716 Paraquat-inducible protein A 0.45 OHPLBJKB_03434 hypothetical protein low > 73
Escherichia coli Nissle 1917 0.66 ECOLIN_RS04990 membrane integrity-associated transporter subunit PqiA 0.14 ECOLIN_RS15705 type VI secretion system baseplate subunit TssK low > 55
Escherichia coli ECRC100 0.66 OKFHMN_05270 pqiA membrane integrity-associated transporter subunit PqiA 0.45 OKFHMN_09890 tssK type VI secretion system baseplate subunit TssK low > 80
Escherichia coli ECRC98 0.66 JDDGAC_08880 pqiA membrane integrity-associated transporter subunit PqiA 0.45 JDDGAC_13490 tssK type VI secretion system baseplate subunit TssK low > 86
Escherichia coli ECRC101 0.66 MCAODC_24660 pqiA membrane integrity-associated transporter subunit PqiA 0.45 MCAODC_00410 tssK type VI secretion system baseplate subunit TssK low > 87
Escherichia coli ECRC99 0.66 KEDOAH_22465 pqiA membrane integrity-associated transporter subunit PqiA 0.45 KEDOAH_18260 tssK type VI secretion system baseplate subunit TssK — —
Escherichia coli ECRC102 0.66 NIAGMN_02990 pqiA membrane integrity-associated transporter subunit PqiA 0.45 NIAGMN_07740 tssK type VI secretion system baseplate subunit TssK — —
Enterobacter sp. TBS_079 0.65 MPMX20_01601 Intermembrane transport protein PqiA 0.32 MPMX20_02680 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.65 EX28DRAFT_1993 integral membrane protein, PqiA family 0.32 EX28DRAFT_0788 type VI secretion protein, VC_A0114 family low > 76
Pantoea sp. MT58 0.65 IAI47_12680 membrane integrity-associated transporter subunit PqiA 0.31 IAI47_11690 type VI secretion system baseplate subunit TssK low > 76
Erwinia tracheiphila SCR3 0.64 LU632_RS09975 pqiA membrane integrity-associated transporter subunit PqiA 0.54 LU632_RS17695 tssK type VI secretion system baseplate subunit TssK low > 74
Vibrio cholerae E7946 ATCC 55056 0.35 CSW01_08795 paraquat-inducible protein A 0.62 CSW01_14585 type VI secretion system baseplate subunit TssK low > 62
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS03465 paraquat-inducible protein A 0.30 QEN71_RS34525 type VI secretion system baseplate subunit TssK low > 153
Paraburkholderia bryophila 376MFSha3.1 0.24 H281DRAFT_01875 paraquat-inducible protein A 0.18 H281DRAFT_05360 type VI secretion system protein ImpJ low > 103
Paraburkholderia graminis OAS925 0.23 ABIE53_005790 paraquat-inducible protein A 0.38 ABIE53_003927 type VI secretion system protein ImpJ low > 113

Not shown: 9 genomes with orthologs for HER17_RS11980 only; 27 genomes with orthologs for HER17_RS04875 only