Conservation of cofitness between HER17_RS12300 and HER17_RS02390 in Pectobacterium carotovorum WPP14

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12300 formate transporter FocA 1.0 HER17_RS02390 fumarate reductase (quinol) flavoprotein subunit 0.90 9
Dickeya dianthicola ME23 0.88 DZA65_RS09980 formate transporter FocA 0.92 DZA65_RS20180 fumarate reductase (quinol) flavoprotein subunit low > 75
Dickeya dadantii 3937 0.88 DDA3937_RS09660 formate transporter FocA 0.92 DDA3937_RS18965 fumarate reductase (quinol) flavoprotein subunit 0.52 35
Serratia liquefaciens MT49 0.88 IAI46_08615 formate transporter FocA 0.89 IAI46_01550 fumarate reductase (quinol) flavoprotein subunit low > 86
Dickeya dianthicola 67-19 0.87 HGI48_RS09670 formate transporter FocA 0.92 HGI48_RS19060 fumarate reductase (quinol) flavoprotein subunit low > 71
Rahnella sp. WP5 0.85 EX31_RS18265 formate transporter FocA 0.85 EX31_RS08900 fumarate reductase (quinol) flavoprotein subunit low > 89
Klebsiella michiganensis M5al 0.83 BWI76_RS09740 formate transporter FocA 0.83 BWI76_RS02455 fumarate reductase flavoprotein subunit low > 92
Escherichia coli BL21 0.83 ECD_00908 formate channel 0.82 ECD_04026 anaerobic fumarate reductase catalytic and NAD/flavoprotein subunit low > 61
Escherichia coli Nissle 1917 0.83 ECOLIN_RS04790 formate transporter FocA 0.83 ECOLIN_RS24150 fumarate reductase (quinol) flavoprotein subunit low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.83 OHPLBJKB_02764 putative formate transporter 1 0.83 OHPLBJKB_03886 Fumarate reductase flavoprotein subunit low > 73
Escherichia coli BW25113 0.83 b0904 focA formate transporter (NCBI) 0.82 b4154 frdA fumarate reductase (NCBI) low > 76
Escherichia coli ECOR27 0.83 NOLOHH_22065 focA formate transporter FocA 0.82 NOLOHH_04605 frdA fumarate reductase (quinol) flavoprotein subunit low > 75
Escherichia coli ECRC100 0.83 OKFHMN_05505 focA formate transporter FocA 0.82 OKFHMN_12345 frdA fumarate reductase (quinol) flavoprotein subunit low > 80
Escherichia coli ECRC102 0.83 NIAGMN_03225 focA formate transporter FocA 0.82 NIAGMN_10190 frdA fumarate reductase (quinol) flavoprotein subunit — —
Escherichia coli ECRC62 0.83 BNILDI_20320 focA formate transporter FocA 0.82 BNILDI_06885 frdA fumarate reductase (quinol) flavoprotein subunit low > 75
Escherichia coli ECRC98 0.83 JDDGAC_09115 focA formate transporter FocA 0.82 JDDGAC_15980 frdA fumarate reductase (quinol) flavoprotein subunit low > 86
Escherichia coli ECRC101 0.83 MCAODC_24895 focA formate transporter FocA 0.82 MCAODC_02855 frdA fumarate reductase (quinol) flavoprotein subunit low > 87
Escherichia coli ECRC99 0.83 KEDOAH_22230 focA formate transporter FocA 0.82 KEDOAH_15820 frdA fumarate reductase (quinol) flavoprotein subunit — —
Erwinia tracheiphila SCR3 0.80 LU632_RS09780 focA formate transporter FocA 0.82 LU632_RS01920 frdA fumarate reductase (quinol) flavoprotein subunit low > 74
Enterobacter sp. TBS_079 0.78 MPMX20_01563 putative formate transporter 1 0.83 MPMX20_00437 Fumarate reductase flavoprotein subunit 0.20 69
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.78 GFF3661 Formate efflux transporter (TC 2.A.44 family) 0.83 GFF1996 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) low > 78
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_08525 formate transporter FocA 0.75 CSW01_13425 fumarate reductase (quinol) flavoprotein subunit low > 62
Methanococcus maripaludis JJ 0.18 MMJJ_RS07650 formate/nitrite transporter family protein 0.25 MMJJ_RS07785 fumarate reductase subunit A low > 28
Methanococcus maripaludis S2 0.18 MMP_RS06705 formate/nitrite transporter family protein 0.25 MMP_RS06565 fumarate reductase subunit A — —

Not shown: 14 genomes with orthologs for HER17_RS12300 only; 7 genomes with orthologs for HER17_RS02390 only