Conservation of cofitness between HER17_RS01970 and HER17_RS01865 in Pectobacterium carotovorum WPP14
25 genomes with putative orthologs of both genes
Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pectobacterium carotovorum WPP14 | 1.0 | HER17_RS01970 | | SlyX family protein | 1.0 | HER17_RS01865 | | ABC transporter permease | 0.55 | 11 |
Dickeya dadantii 3937 | 0.74 | DDA3937_RS19365 | | SlyX family protein | 0.93 | DDA3937_RS03510 | | ABC transporter permease | — | — |
Dickeya dianthicola ME23 | 0.73 | DZA65_RS20585 | | phi X174 lysis protein | 0.92 | DZA65_RS03730 | | ABC transporter permease | — | — |
Dickeya dianthicola 67-19 | 0.73 | HGI48_RS19495 | | SlyX family protein | 0.92 | HGI48_RS03610 | | ABC transporter permease | — | — |
Rahnella sp. WP5 | 0.70 | EX31_RS04480 | | lysis protein | 0.81 | EX31_RS00370 | | ABC transporter permease | low | > 89 |
Escherichia coli ECRC101 | 0.68 | MCAODC_07820 | slyX | Protein SlyX | 0.44 | MCAODC_16610 | ddpC | D,D-dipeptide ABC transporter permease | low | > 87 |
Escherichia coli ECRC99 | 0.68 | KEDOAH_10850 | slyX | Protein SlyX | 0.43 | KEDOAH_27110 | ddpC | D,D-dipeptide ABC transporter permease | — | — |
Escherichia coli ECOR38 | 0.68 | HEPCGN_16120 | slyX | Protein SlyX | 0.43 | HEPCGN_26465 | ddpC | D,D-dipeptide ABC transporter permease | low | > 87 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.68 | OHPLBJKB_00355 | | Protein SlyX | 0.43 | OHPLBJKB_02232 | | putative D,D-dipeptide transport system permease protein DdpC | low | > 73 |
Escherichia coli BL21 | 0.68 | ECD_03199 | | phi X174 lysis protein | 0.43 | ECD_01443 | | D,D-dipeptide ABC transporter permease | low | > 61 |
Escherichia coli ECRC100 | 0.68 | OKFHMN_17290 | slyX | Protein SlyX | 0.43 | OKFHMN_01330 | ddpC | D,D-dipeptide ABC transporter permease | — | — |
Erwinia tracheiphila SCR3 | 0.68 | LU632_RS22720 | | SlyX family protein | 0.46 | LU632_RS19045 | | ABC transporter permease | low | > 74 |
Escherichia coli ECRC62 | 0.68 | BNILDI_02430 | slyX | Protein SlyX | 0.43 | BNILDI_17455 | ddpC | D,D-dipeptide ABC transporter permease | — | — |
Escherichia coli BW25113 | 0.68 | b3348 | slyX | hypothetical protein (NCBI) | 0.43 | b1485 | ddpC | D-ala-D-ala transporter subunit (NCBI) | low | > 76 |
Escherichia coli ECOR27 | 0.68 | NOLOHH_09090 | slyX | Protein SlyX | 0.43 | NOLOHH_18970 | ddpC | D,D-dipeptide ABC transporter permease | — | — |
Escherichia coli ECRC98 | 0.68 | JDDGAC_20920 | slyX | Protein SlyX | 0.43 | JDDGAC_03820 | ddpC | D,D-dipeptide ABC transporter permease | — | — |
Escherichia coli Nissle 1917 | 0.68 | ECOLIN_RS19175 | | protein SlyX | 0.50 | ECOLIN_RS23610 | | ABC transporter permease | — | — |
Escherichia coli ECRC102 | 0.68 | NIAGMN_15060 | slyX | Protein SlyX | 0.43 | NIAGMN_25460 | ddpC | D,D-dipeptide ABC transporter permease | — | — |
Escherichia fergusonii Becca | 0.68 | EFB2_00475 | | Protein SlyX | 0.50 | EFB2_04508 | | putative D,D-dipeptide transport system permease protein DdpC | low | > 86 |
Klebsiella michiganensis M5al | 0.67 | BWI76_RS25915 | | protein SlyX | 0.81 | BWI76_RS19310 | | ABC transporter permease | low | > 92 |
Pantoea sp. MT58 | 0.67 | IAI47_02045 | | SlyX family protein | 0.80 | IAI47_10090 | | ABC transporter permease | low | > 76 |
Enterobacter sp. TBS_079 | 0.67 | MPMX20_04241 | | Protein SlyX | 0.43 | MPMX20_02358 | | putative D,D-dipeptide transport system permease protein DdpC | 0.15 | 69 |
Enterobacter asburiae PDN3 | 0.66 | EX28DRAFT_4182 | | Uncharacterized protein conserved in bacteria | 0.50 | EX28DRAFT_2397 | | ABC-type dipeptide/oligopeptide/nickel transport systems, permease components | low | > 76 |
Serratia liquefaciens MT49 | 0.65 | IAI46_23500 | | SlyX family protein | 0.48 | IAI46_15645 | | ABC transporter permease | low | > 86 |
Rhodospirillum rubrum S1H | 0.43 | Rru_A0103 | | SlyX (NCBI) | 0.55 | Rru_A1919 | | Binding-protein-dependent transport systems inner membrane component (NCBI) | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.35 | AO356_17980 | | hypothetical protein | 0.72 | AO356_06860 | | D-ala-D-ala transporter subunit | — | — |
Not shown: 14 genomes with orthologs for HER17_RS01970 only; 20 genomes with orthologs for HER17_RS01865 only