Conservation of cofitness between HER17_RS04200 and HER17_RS01175 in Pectobacterium carotovorum WPP14

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS04200 7-carboxy-7-deazaguanine synthase QueE 1.0 HER17_RS01175 dTDP-4-amino-4,6-dideoxygalactose transaminase 0.65 13
Serratia liquefaciens MT49 0.86 IAI46_03675 7-carboxy-7-deazaguanine synthase QueE 0.85 IAI46_00625 dTDP-4-amino-4,6-dideoxygalactose transaminase low > 86
Dickeya dadantii 3937 0.86 DDA3937_RS16970 7-carboxy-7-deazaguanine synthase QueE 0.80 DDA3937_RS20040 dTDP-4-amino-4,6-dideoxygalactose transaminase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF4831 Queuosine Biosynthesis QueE Radical SAM 0.84 GFF2882 Lipopolysaccharide biosynthesis protein RffA low > 78
Escherichia coli ECRC99 0.85 KEDOAH_07830 queE 7-carboxy-7-deazaguanine synthase QueE 0.85 KEDOAH_13605 rffA dTDP-4-amino-4,6-dideoxygalactose transaminase
Escherichia coli ECRC62 0.85 BNILDI_10675 queE 7-carboxy-7-deazaguanine synthase QueE 0.85 BNILDI_04845 rffA dTDP-4-amino-4,6-dideoxygalactose transaminase low > 75
Escherichia coli ECRC98 0.85 JDDGAC_23965 queE 7-carboxy-7-deazaguanine synthase QueE 0.85 JDDGAC_18170 rffA dTDP-4-amino-4,6-dideoxygalactose transaminase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_00957 7-carboxy-7-deazaguanine synthase 0.85 OHPLBJKB_04263 dTDP-4-amino-4,6-dideoxygalactose transaminase low > 73
Escherichia coli BL21 0.85 ECD_02622 7-carboxy-7-deazaguanine synthase; queosine biosynthesis 0.85 ECD_03669 TDP-4-oxo-6-deoxy-D-glucose transaminase low > 61
Escherichia coli BW25113 0.85 b2777 ygcF hypothetical protein (NCBI) 0.85 b3791 rffA TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) low > 76
Escherichia coli ECRC102 0.85 NIAGMN_18070 queE 7-carboxy-7-deazaguanine synthase QueE 0.85 NIAGMN_12300 rffA dTDP-4-amino-4,6-dideoxygalactose transaminase
Escherichia coli ECRC101 0.85 MCAODC_10825 queE 7-carboxy-7-deazaguanine synthase QueE 0.85 MCAODC_05050 rffA dTDP-4-amino-4,6-dideoxygalactose transaminase low > 87
Klebsiella michiganensis M5al 0.85 BWI76_RS22780 7-carboxy-7-deazaguanine synthase QueE 0.84 BWI76_RS01115 dTDP-4-amino-4,6-dideoxygalactose transaminase low > 92
Escherichia coli ECRC100 0.85 OKFHMN_20300 queE 7-carboxy-7-deazaguanine synthase QueE 0.85 OKFHMN_14545 rffA dTDP-4-amino-4,6-dideoxygalactose transaminase low > 80
Escherichia coli ECOR27 0.85 NOLOHH_12170 queE 7-carboxy-7-deazaguanine synthase QueE 0.85 NOLOHH_06680 rffA dTDP-4-amino-4,6-dideoxygalactose transaminase low > 75
Escherichia coli ECOR38 0.85 HEPCGN_19205 queE 7-carboxy-7-deazaguanine synthase QueE 0.85 HEPCGN_13255 rffA dTDP-4-amino-4,6-dideoxygalactose transaminase low > 87
Escherichia fergusonii Becca 0.85 EFB2_01141 7-carboxy-7-deazaguanine synthase 0.85 EFB2_04848 dTDP-4-amino-4,6-dideoxygalactose transaminase low > 86
Escherichia coli Nissle 1917 0.85 ECOLIN_RS15475 7-carboxy-7-deazaguanine synthase QueE 0.85 ECOLIN_RS21760 dTDP-4-amino-4,6-dideoxygalactose transaminase
Enterobacter sp. TBS_079 0.84 MPMX20_03645 7-carboxy-7-deazaguanine synthase 0.85 MPMX20_04484 dTDP-4-amino-4,6-dideoxygalactose transaminase low > 85
Enterobacter asburiae PDN3 0.84 EX28DRAFT_2855 putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 0.84 EX28DRAFT_4459 TDP-4-keto-6-deoxy-D-glucose transaminase low > 76
Erwinia tracheiphila SCR3 0.84 LU632_RS06390 queE 7-carboxy-7-deazaguanine synthase QueE 0.83 LU632_RS24225 rffA dTDP-4-amino-4,6-dideoxygalactose transaminase low > 74
Rahnella sp. WP5 0.83 EX31_RS07920 7-carboxy-7-deazaguanine synthase QueE 0.80 EX31_RS15080 dTDP-4-amino-4,6-dideoxygalactose transaminase low > 89
Pantoea sp. MT58 0.80 IAI47_04140 7-carboxy-7-deazaguanine synthase QueE 0.85 IAI47_18485 dTDP-4-amino-4,6-dideoxygalactose transaminase low > 76
Dickeya dianthicola 67-19 0.79 HGI48_RS17035 7-carboxy-7-deazaguanine synthase QueE 0.79 HGI48_RS20185 dTDP-4-amino-4,6-dideoxygalactose transaminase low > 71
Dickeya dianthicola ME23 0.79 DZA65_RS18110 7-carboxy-7-deazaguanine synthase QueE 0.79 DZA65_RS21230 dTDP-4-amino-4,6-dideoxygalactose transaminase low > 75
Pedobacter sp. GW460-11-11-14-LB5 0.23 CA265_RS08930 7-carboxy-7-deazaguanine synthase QueE 0.23 CA265_RS01760 aminotransferase DegT low > 88
Ralstonia sp. UNC404CL21Col 0.19 ABZR87_RS12145 7-carboxy-7-deazaguanine synthase 0.49 ABZR87_RS08670 dTDP-4-amino-4,6-dideoxygalactose transaminase low > 80
Pseudomonas fluorescens GW456-L13 0.16 PfGW456L13_1861 Queuosine Biosynthesis QueE Radical SAM 0.58 PfGW456L13_3984 Lipopolysaccharide biosynthesis protein RffA low > 87

Not shown: 56 genomes with orthologs for HER17_RS04200 only; 1 genomes with orthologs for HER17_RS01175 only