Conservation of cofitness between HER17_RS14220 and HER17_RS00220 in Pectobacterium carotovorum WPP14

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS14220 dicarboxylate/amino acid:cation symporter 1.0 HER17_RS00220 ABC transporter substrate-binding protein 0.67 11
Dickeya dadantii 3937 0.83 DDA3937_RS07395 dicarboxylate/amino acid:cation symporter 0.90 DDA3937_RS00460 ABC transporter substrate-binding protein low > 74
Dickeya dianthicola ME23 0.81 DZA65_RS07770 dicarboxylate/amino acid:cation symporter 0.90 DZA65_RS21920 ABC transporter substrate-binding protein low > 75
Dickeya dianthicola 67-19 0.81 HGI48_RS07260 dicarboxylate/amino acid:cation symporter 0.90 HGI48_RS20925 ABC transporter substrate-binding protein low > 71
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_2249 Proton/glutamate symport protein @ Sodium/glutamate symport protein 0.52 Pf6N2E2_3307 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) low > 103
Pseudomonas simiae WCS417 0.61 PS417_19045 amino acid:proton symporter 0.52 PS417_04075 peptide ABC transporter substrate-binding protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.61 AO356_01905 L-aspartate transporter (from data) 0.54 AO356_07240 peptide ABC transporter substrate-binding protein low > 104
Azospirillum sp. SherDot2 0.55 MPMX19_03595 C4-dicarboxylate transport protein 2 0.58 MPMX19_04419 Periplasmic dipeptide transport protein low > 112
Variovorax sp. SCN45 0.53 GFF5354 C4-dicarboxylate transport protein 0.58 GFF7288 Dipeptide ABC transporter, substrate-binding protein DppA (TC 3.A.1.5.2) low > 127
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_5607 C4-dicarboxylate transport protein 0.53 Pf1N1B4_1120 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) low > 87
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS33330 C4-dicarboxylate ABC transporter 0.56 BPHYT_RS18690 ABC transporter low > 109
Variovorax sp. OAS795 0.50 ABID97_RS23115 dicarboxylate/amino acid:cation symporter 0.57 ABID97_RS04470 ABC transporter substrate-binding protein low > 91
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS33810 dicarboxylate/amino acid:cation symporter 0.55 QEN71_RS28705 ABC transporter substrate-binding protein low > 153
Enterobacter sp. TBS_079 0.48 MPMX20_02796 C4-dicarboxylate transport protein 0.84 MPMX20_00190 Periplasmic dipeptide transport protein low > 85
Pedobacter sp. GW460-11-11-14-LB5 0.48 CA265_RS10595 dicarboxylate/amino acid:cation symporter 0.14 CA265_RS01030 ABC transporter substrate-binding protein low > 88
Klebsiella michiganensis M5al 0.47 BWI76_RS19175 dicarboxylate/amino acid:cation symporter 0.86 BWI76_RS26885 ABC transporter substrate-binding protein low > 92
Enterobacter asburiae PDN3 0.46 EX28DRAFT_0664 Na+/H+-dicarboxylate symporters 0.85 EX28DRAFT_3804 ABC-type dipeptide transport system, periplasmic component low > 76
Escherichia coli ECOR38 0.42 HEPCGN_01380 gltP dicarboxylate/amino acid:cation symporter 0.85 HEPCGN_14960 dppA dipeptide ABC transporter substrate-binding protein DppA low > 87
Escherichia coli ECRC98 0.42 JDDGAC_10545 gltP dicarboxylate/amino acid:cation symporter 0.85 JDDGAC_19730 dppA dipeptide ABC transporter substrate-binding protein DppA low > 86
Escherichia coli ECRC100 0.42 OKFHMN_06890 gltP dicarboxylate/amino acid:cation symporter 0.85 OKFHMN_16100 dppA dipeptide ABC transporter substrate-binding protein DppA low > 80
Escherichia coli ECRC101 0.42 MCAODC_26110 gltP dicarboxylate/amino acid:cation symporter 0.85 MCAODC_06615 dppA dipeptide ABC transporter substrate-binding protein DppA low > 87
Escherichia coli ECRC102 0.42 NIAGMN_04940 gltP dicarboxylate/amino acid:cation symporter 0.85 NIAGMN_13860 dppA dipeptide ABC transporter substrate-binding protein DppA — —
Escherichia coli ECRC99 0.42 KEDOAH_21075 gltP dicarboxylate/amino acid:cation symporter 0.85 KEDOAH_12050 dppA dipeptide ABC transporter substrate-binding protein DppA — —

Not shown: 12 genomes with orthologs for HER17_RS14220 only; 33 genomes with orthologs for HER17_RS00220 only