Conservation of cofitness between HEPCGN_04805 and HEPCGN_19575 in Escherichia coli ECOR38

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_04805 copD copper homeostasis membrane protein CopD 1.0 HEPCGN_19575 ygeA amino acid racemase 0.59 4
Escherichia coli ECRC101 0.98 MCAODC_19000 copD copper homeostasis membrane protein CopD 1.00 MCAODC_10460 ygeA amino acid racemase low > 87
Escherichia coli ECRC99 0.98 KEDOAH_01700 copD copper homeostasis membrane protein CopD 1.00 KEDOAH_08195 ygeA amino acid racemase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.98 OHPLBJKB_01891 Inner membrane protein YebZ 1.00 OHPLBJKB_00889 Putative racemase YgeA low > 73
Escherichia coli ECRC102 0.98 NIAGMN_01655 copD copper homeostasis membrane protein CopD 1.00 NIAGMN_17705 ygeA amino acid racemase — —
Escherichia coli BW25113 0.98 b1840 yebZ predicted inner membrane protein (NCBI) 0.99 b2840 ygeA predicted racemase (NCBI) low > 76
Escherichia coli ECRC98 0.98 JDDGAC_00980 copD copper homeostasis membrane protein CopD 0.99 JDDGAC_23600 ygeA amino acid racemase low > 86
Escherichia coli ECRC100 0.98 OKFHMN_26405 copD copper homeostasis membrane protein CopD 1.00 OKFHMN_19935 ygeA amino acid racemase low > 80
Escherichia coli ECRC62 0.98 BNILDI_15710 copD copper homeostasis membrane protein CopD 1.00 BNILDI_10300 ygeA amino acid racemase low > 75
Escherichia coli ECOR27 0.98 NOLOHH_16915 copD copper homeostasis membrane protein CopD 1.00 NOLOHH_11820 ygeA amino acid racemase low > 75
Escherichia coli Nissle 1917 0.98 ECOLIN_RS10245 copper homeostasis membrane protein CopD 1.00 ECOLIN_RS15940 amino acid racemase — —
Escherichia fergusonii Becca 0.98 EFB2_02104 Inner membrane protein YebZ 1.00 EFB2_01043 L-aspartate/glutamate-specific racemase low > 86
Escherichia coli BL21 0.97 ECD_01811 inner membrane protein 1.00 ECD_02688 Asp/Glu_racemase family protein low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF1619 Copper resistance protein D 0.83 GFF1325 Aspartate racemase (EC 5.1.1.13) low > 78
Enterobacter sp. TBS_079 0.52 MPMX20_02747 Inner membrane protein YebZ 0.84 MPMX20_03707 L-aspartate/glutamate-specific racemase low > 85
Klebsiella michiganensis M5al 0.50 BWI76_RS18055 copper resistance protein D 0.82 BWI76_RS23370 aspartate/glutamate racemase low > 92
Enterobacter asburiae PDN3 0.50 EX28DRAFT_0714 Putative copper export protein 0.83 EX28DRAFT_2918 aspartate racemase low > 76
Dickeya dianthicola 67-19 0.30 HGI48_RS10195 copper homeostasis membrane protein CopD 0.13 HGI48_RS07250 aspartate/glutamate racemase family protein low > 71
Rahnella sp. WP5 0.30 EX31_RS24775 copper homeostasis membrane protein CopD 0.62 EX31_RS20045 aspartate/glutamate racemase family protein low > 89
Pantoea sp. MT58 0.28 IAI47_08535 copper homeostasis membrane protein CopD 0.59 IAI47_18995 aspartate/glutamate racemase family protein low > 76
Dickeya dadantii 3937 0.28 DDA3937_RS10165 copper homeostasis membrane protein CopD 0.13 DDA3937_RS07385 aspartate/glutamate racemase family protein low > 74
Serratia liquefaciens MT49 0.28 IAI46_10010 copper homeostasis membrane protein CopD 0.61 IAI46_18225 aspartate/glutamate racemase family protein low > 86
Dickeya dianthicola ME23 0.28 DZA65_RS10610 copper homeostasis membrane protein CopD 0.14 DZA65_RS07760 aspartate/glutamate racemase family protein low > 75
Pseudomonas fluorescens SBW25-INTG 0.14 PFLU_RS19275 copper homeostasis membrane protein CopD 0.50 PFLU_RS14675 aspartate/glutamate racemase family protein low > 109
Pseudomonas fluorescens SBW25 0.14 PFLU_RS19275 copper homeostasis membrane protein CopD 0.50 PFLU_RS14675 aspartate/glutamate racemase family protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.12 Pf1N1B4_47 Copper resistance protein D 0.55 Pf1N1B4_4650 Aspartate racemase (EC 5.1.1.13) low > 87
Pseudomonas sp. RS175 0.12 PFR28_03392 Copper resistance protein D 0.55 PFR28_02199 L-aspartate/glutamate-specific racemase low > 88
Pseudomonas simiae WCS417 0.10 PS417_17350 copper resistance protein CopD 0.52 PS417_13940 racemase low > 88
Brevundimonas sp. GW460-12-10-14-LB2 0.09 A4249_RS03235 copper homeostasis membrane protein CopD 0.11 A4249_RS15755 amino acid racemase low > 48

Not shown: 11 genomes with orthologs for HEPCGN_04805 only; 34 genomes with orthologs for HEPCGN_19575 only