Conservation of cofitness between HEPCGN_26710 and HEPCGN_17740 in Escherichia coli ECOR38

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_26710 spoIVCA DNA-invertase 1.0 HEPCGN_17740 Quorum sensing DNA-binding response regulator in two-component regulatory system with QseC 0.52 18
Escherichia fergusonii Becca 0.98 EFB2_03222 DNA-invertase hin 1.00 EFB2_00788 Transcriptional regulatory protein QseB low > 86
Escherichia coli ECRC101 0.89 MCAODC_20820 spoIVCA DNA-invertase 0.99 MCAODC_09395 Transcriptional regulatory protein QseB low > 87
Escherichia coli ECRC98 0.88 JDDGAC_09160 spoIVCA DNA-invertase 0.99 JDDGAC_22515 Transcriptional regulatory protein QseB low > 86
Escherichia coli ECRC102 0.87 NIAGMN_07460 pinE site-specific DNA recombinase 0.99 NIAGMN_16645 Transcriptional regulatory protein QseB — —
Escherichia coli BW25113 0.87 b1158 pin e14 prophage; site-specific DNA recombinase (NCBI) 0.99 b3025 qseB DNA-binding response regulator in two-component regulatory system with QseC (NCBI) low > 76
Escherichia coli ECRC100 0.86 OKFHMN_09410 pinE site-specific DNA recombinase 0.99 OKFHMN_18880 Transcriptional regulatory protein QseB low > 80
Enterobacter asburiae PDN3 0.80 EX28DRAFT_3112 Site-specific recombinases, DNA invertase Pin homologs 0.83 EX28DRAFT_3057 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 76
Klebsiella michiganensis M5al 0.65 BWI76_RS12375 DNA-invertase hin 0.85 BWI76_RS24335 two-component system response regulator QseB low > 92
Shewanella oneidensis MR-1 0.58 SOA0170 ISSod9, DNA-invertase (NCBI ptt file) 0.42 SO2104 DNA-binding response regulator YgiX, putative (NCBI ptt file) — —
Escherichia coli ECRC62 0.55 BNILDI_21055 DNA-invertase 0.99 BNILDI_00855 Transcriptional regulatory protein QseB low > 75
Variovorax sp. SCN45 0.54 GFF7081 Mobile element protein 0.47 GFF1175 Two-component system response regulator QseB — —
Dickeya dianthicola 67-19 0.53 HGI48_RS12185 recombinase family protein 0.69 HGI48_RS21345 response regulator low > 71
Dickeya dianthicola ME23 0.52 DZA65_RS12635 recombinase family protein 0.68 DZA65_RS22325 response regulator low > 75
Brevundimonas sp. GW460-12-10-14-LB2 0.45 A4249_RS16275 recombinase family protein 0.42 A4249_RS11495 response regulator transcription factor low > 48
Dinoroseobacter shibae DFL-12 0.44 Dshi_4084 Resolvase domain (RefSeq) 0.32 Dshi_3124 two component transcriptional regulator, winged helix family (RefSeq) low > 64
Magnetospirillum magneticum AMB-1 0.44 AMB_RS16710 recombinase family protein 0.39 AMB_RS16365 DNA-binding response regulator low > 64
Paraburkholderia graminis OAS925 0.44 ABIE53_000503 DNA invertase Pin-like site-specific DNA recombinase 0.52 ABIE53_003418 two-component system response regulator QseB low > 113
Azospirillum brasilense Sp245 0.43 AZOBR_RS32770 invertase 0.41 AZOBR_RS18790 transcriptional regulator — —
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS00040 recombinase 0.48 RR42_RS30345 XRE family transcriptional regulator low > 128
Azospirillum sp. SherDot2 0.41 MPMX19_06437 DNA-invertase hin 0.43 MPMX19_04594 Transcriptional regulatory protein QseB low > 112
Escherichia coli ECOR27 0.36 NOLOHH_00080 Resolvase/invertase-type recombinase catalytic domain-containing protein 0.99 NOLOHH_10660 Transcriptional regulatory protein QseB low > 75
Pseudomonas putida KT2440 0.36 PP_5490 site-specific DNA recombinase 0.47 PP_4225 two component system DNA-binding transcriptional activator QseB low > 96
Shewanella sp. ANA-3 0.32 Shewana3_2637 resolvase domain-containing protein (RefSeq) 0.42 Shewana3_1885 two component transcriptional regulator (RefSeq) low > 73
Rhizobium sp. OAE497 0.17 ABIE40_RS04405 recombinase family protein 0.42 ABIE40_RS17030 response regulator low > 107

Not shown: 9 genomes with orthologs for HEPCGN_26710 only; 49 genomes with orthologs for HEPCGN_17740 only