Conservation of cofitness between HEPCGN_06105 and HEPCGN_13285 in Escherichia coli ECOR38

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_06105 ynfM Inner membrane transport protein YnfM 1.0 HEPCGN_13285 wzzE ECA polysaccharide chain length modulation protein 0.61 43
Escherichia coli ECRC62 1.00 BNILDI_17025 ynfM Inner membrane transport protein YnfM 0.99 BNILDI_04815 wzzE ECA polysaccharide chain length modulation protein low > 75
Escherichia coli ECRC98 1.00 JDDGAC_02320 ynfM Inner membrane transport protein YnfM 0.99 JDDGAC_18200 wzzE ECA polysaccharide chain length modulation protein low > 86
Escherichia coli ECRC100 1.00 OKFHMN_27730 ynfM Inner membrane transport protein YnfM 0.99 OKFHMN_14575 wzzE ECA polysaccharide chain length modulation protein low > 80
Escherichia coli ECRC101 1.00 MCAODC_17680 ynfM Inner membrane transport protein YnfM 0.99 MCAODC_05080 wzzE ECA polysaccharide chain length modulation protein low > 87
Escherichia coli ECRC102 1.00 NIAGMN_00345 ynfM Inner membrane transport protein YnfM 0.99 NIAGMN_12330 wzzE ECA polysaccharide chain length modulation protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02130 Inner membrane transport protein YnfM 0.99 OHPLBJKB_04269 ECA polysaccharide chain length modulation protein 0.30 42
Escherichia coli BW25113 1.00 b1596 ynfM predicted transporter (NCBI) 0.99 b3785 wzzE putative transport protein (VIMSS) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_18235 araJ MFS transporter 0.99 NOLOHH_06710 wzzE ECA polysaccharide chain length modulation protein low > 75
Escherichia coli BL21 1.00 ECD_01565 putative arabinose efflux transporter 0.99 ECD_03663 Entobacterial Common Antigen (ECA) polysaccharide chain length modulation protein low > 61
Escherichia fergusonii Becca 1.00 EFB2_02396 Inner membrane transport protein YnfM 1.00 EFB2_04854 ECA polysaccharide chain length modulation protein low > 86
Escherichia coli ECRC99 1.00 KEDOAH_00375 araJ MFS transporter 0.99 KEDOAH_13575 wzzE ECA polysaccharide chain length modulation protein — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS08915 MFS transporter 1.00 ECOLIN_RS21730 ECA polysaccharide chain length modulation protein low > 55
Enterobacter sp. TBS_079 0.88 MPMX20_02061 Inner membrane transport protein YnfM 0.85 MPMX20_04488 ECA polysaccharide chain length modulation protein low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF1787 Permeases of the major facilitator superfamily 0.92 GFF2888 regulator of length of O-antigen component of lipopolysaccharide chains low > 78
Enterobacter asburiae PDN3 0.83 EX28DRAFT_1495 Arabinose efflux permease 0.83 EX28DRAFT_4455 Chain length determinant protein 0.63 17
Klebsiella michiganensis M5al 0.82 BWI76_RS15965 MFS transporter 0.84 BWI76_RS01085 polysaccharide chain length modulation protein low > 92
Pantoea sp. MT58 0.74 IAI47_09740 MFS transporter 0.64 IAI47_18515 ECA polysaccharide chain length modulation protein low > 76
Serratia liquefaciens MT49 0.74 IAI46_11675 MFS transporter 0.68 IAI46_00595 ECA polysaccharide chain length modulation protein low > 86
Rahnella sp. WP5 0.69 EX31_RS16995 MFS transporter 0.68 EX31_RS15060 ECA polysaccharide chain length modulation protein low > 89
Pectobacterium carotovorum WPP14 0.67 HER17_RS10745 MFS transporter 0.72 HER17_RS01150 ECA polysaccharide chain length modulation protein low > 75
Dickeya dadantii 3937 0.64 DDA3937_RS10665 MFS transporter 0.48 DDA3937_RS20060 ECA polysaccharide chain length modulation protein low > 74
Dickeya dianthicola ME23 0.63 DZA65_RS11135 MFS transporter 0.47 DZA65_RS21250 ECA polysaccharide chain length modulation protein low > 75
Dickeya dianthicola 67-19 0.63 HGI48_RS10665 MFS transporter 0.47 HGI48_RS20205 ECA polysaccharide chain length modulation protein low > 71
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_09295 hypothetical protein 0.09 AO356_03425 chain-length determining protein low > 104
Pseudomonas sp. RS175 0.59 PFR28_05018 Inner membrane transport protein YnfM 0.08 PFR28_00915 Chain length determinant protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_3736 Permeases of the major facilitator superfamily 0.09 Pf6N2E2_2514 regulator of length of O-antigen component of lipopolysaccharide chains low > 103

Not shown: 38 genomes with orthologs for HEPCGN_06105 only; 1 genomes with orthologs for HEPCGN_13285 only