Conservation of cofitness between GFF3399 and GFF784 in Sphingobium sp. HT1-2

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF3399 Lactate-responsive regulator LldR in Enterobacteria, GntR family 1.0 GFF784 Nitrogen regulatory protein P-II, GlnK 0.68 20
Enterobacter sp. TBS_079 0.36 MPMX20_00130 Putative L-lactate dehydrogenase operon regulatory protein 0.65 MPMX20_01042 Nitrogen regulatory protein P-II 2 low > 85
Enterobacter asburiae PDN3 0.36 EX28DRAFT_3854 Transcriptional regulators 0.65 EX28DRAFT_2519 nitrogen regulatory protein P-II family low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF410 Lactate-responsive regulator LldR in Enterobacteria, GntR family 0.65 GFF4367 Nitrogen regulatory protein P-II, glnK low > 78
Klebsiella pneumoniae MKP103 0.36 KDGMDA_07875 transcriptional regulator LldR 0.65 KDGMDA_14680 P-II family nitrogen regulator low > 95
Escherichia coli ECRC62 0.36 BNILDI_03860 lldR transcriptional regulator LldR 0.65 BNILDI_22615 glnK P-II family nitrogen regulator low > 75
Escherichia coli ECOR27 0.36 NOLOHH_07655 lldR transcriptional regulator LldR 0.65 NOLOHH_01200 glnK P-II family nitrogen regulator low > 76
Escherichia coli BW25113 0.35 b3604 lldR DNA-binding transcriptional repressor (NCBI) 0.65 b0450 glnK nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_00095 Putative L-lactate dehydrogenase operon regulatory protein 0.65 OHPLBJKB_03223 Nitrogen regulatory protein P-II 2 low > 74
Escherichia coli BL21 0.35 ECD_03462 dual role activator/repressor for lldPRD operon 0.65 ECD_00402 nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB low > 61
Klebsiella michiganensis M5al 0.35 BWI76_RS27190 transcriptional regulator LldR 0.66 BWI76_RS06600 nitrogen regulatory protein P-II 2 — —
Pantoea sp. MT58 0.35 IAI47_15025 transcriptional regulator LldR 0.67 IAI47_14585 P-II family nitrogen regulator low > 76
Escherichia coli ECOR38 0.35 HEPCGN_14615 lldR transcriptional regulator LldR 0.65 HEPCGN_06880 glnK P-II family nitrogen regulator low > 88
Escherichia coli ECRC102 0.35 NIAGMN_13535 lldR transcriptional regulator LldR 0.65 NIAGMN_06320 glnK P-II family nitrogen regulator low > 80
Escherichia coli ECRC101 0.35 MCAODC_06285 lldR transcriptional regulator LldR 0.65 MCAODC_27490 glnK P-II family nitrogen regulator low > 87
Escherichia coli ECRC100 0.35 OKFHMN_15775 lldR transcriptional regulator LldR 0.65 OKFHMN_08265 glnK P-II family nitrogen regulator low > 79
Escherichia coli ECRC98 0.35 JDDGAC_19400 lldR transcriptional regulator LldR 0.65 JDDGAC_11920 glnK P-II family nitrogen regulator low > 87
Escherichia coli ECRC99 0.35 KEDOAH_12375 lldR transcriptional regulator LldR 0.65 KEDOAH_19700 glnK P-II family nitrogen regulator — —
Escherichia coli Nissle 1917 0.35 ECOLIN_RS20575 transcriptional regulator LldR 0.65 ECOLIN_RS02695 P-II family nitrogen regulator — —
Escherichia fergusonii Becca 0.35 EFB2_00206 Putative L-lactate dehydrogenase operon regulatory protein 0.65 EFB2_03607 Nitrogen regulatory protein P-II 2 low > 86
Pantoea agglomerans CFBP13505 P0401 0.34 PagCFBP13505_RS10135 transcriptional regulator LldR 0.67 PagCFBP13505_RS10610 P-II family nitrogen regulator low > 74
Magnetospirillum magneticum AMB-1 0.27 AMB_RS01210 FCD domain-containing protein 0.75 AMB_RS00075 P-II family nitrogen regulator — —
Azospirillum sp. SherDot2 0.22 MPMX19_06090 Pyruvate dehydrogenase complex repressor 0.78 MPMX19_05521 Nitrogen regulatory protein P-II 2 low > 112
Serratia liquefaciens MT49 0.22 IAI46_21330 pyruvate dehydrogenase complex transcriptional repressor PdhR 0.66 IAI46_05080 P-II family nitrogen regulator low > 87
Erwinia amylovora T8 0.20 OLJFJH_01000 pyruvate dehydrogenase complex transcriptional repressor PdhR 0.66 OLJFJH_17910 P-II family nitrogen regulator — —
Dinoroseobacter shibae DFL-12 0.20 Dshi_3026 GntR domain protein (RefSeq) 0.68 Dshi_0143 nitrogen regulatory protein P-II (RefSeq) — —
Azospirillum brasilense Sp245 0.19 AZOBR_RS25130 GntR family transcriptional regulator 0.79 AZOBR_RS02290 nitrogen regulatory protein P-II 1 low > 97
Rhodospirillum rubrum S1H 0.15 Rru_A1414 regulatory protein GntR (NCBI) 0.72 Rru_A1130 Nitrogen regulatory protein P-II (GlnB, GlnK) (NCBI) low > 58

Not shown: 51 genomes with orthologs for GFF3399 only; 4 genomes with orthologs for GFF784 only